Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1078
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.6  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.5  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   4.6  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.6  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.1  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +3

Query: 423  CDGPRG---C*RNVISAQCSECQREEIQASAGNG 515
            CD   G   C  NVI   C+EC+       +GNG
Sbjct: 902  CDAINGNCHCKPNVIGRTCNECKNGYWNIVSGNG 935


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 125 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 30
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 77  LALRTGACRVWTGSGCGRCRVWSM 148
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 141 QTRHRPHPLPVQTRHAPVLRANPYSEVT 58
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 141 QTRHRPHPLPVQTRHAPVLRANPYSEVT 58
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 365 PLNGGRTESCRSRTKRNR 312
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,808
Number of Sequences: 2352
Number of extensions: 16888
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)