Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1077
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 249  KNVYMFFFFNSILVSIGGCVQL 184
            K+V+ FF FN++ V +   +QL
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 249  KNVYMFFFFNSILVSIGGCVQL 184
            K+V+ FF FN++ V +   +QL
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQL 1288


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 393 FTTQTVFL---FWFFLPSGC*GTLMYELLCFYFYFC 491
           FT   +FL   ++F +P       ++ LLC Y+++C
Sbjct: 123 FTVHLLFLLCIYYFVVP-------LFFLLCIYYFYC 151


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 731 LCNIHIFIYNAKYTETIWVCT 669
           + ++ I +    Y  T+W+CT
Sbjct: 719 ITSVMIAVSGLVYIATVWICT 739



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 695 YTETIWVCT 669
           Y ET W+CT
Sbjct: 88  YLETTWICT 96


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 695 YTETIWVCT 669
           Y ET W+CT
Sbjct: 106 YLETTWICT 114


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 389 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 270
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 378 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 417


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 389 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 270
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 380 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,519
Number of Sequences: 336
Number of extensions: 4191
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)