BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1077
(756 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236124-1|AAF68382.1| 107|Anopheles gambiae thioredoxin 1 prot... 51 4e-08
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 25 2.5
>AF236124-1|AAF68382.1| 107|Anopheles gambiae thioredoxin 1
protein.
Length = 107
Score = 50.8 bits (116), Expect = 4e-08
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 3 DSIXXXXXXXXECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 140
D I ECE++A++YNI SMPTF+F+K + + +FSGAN +
Sbjct: 51 DKIVVVKVDVDECEELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 493 RLTQMLISPILINV*DKFPSCF*KLL*VTSITMFFFLCY 609
R T+ML++ +L+ + +FP LL FFF CY
Sbjct: 317 RTTRMLLAVLLLFLITEFPQGILGLLSAVLKKDFFFNCY 355
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,491
Number of Sequences: 2352
Number of extensions: 13954
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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