Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1074
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKD7 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_A4YGM7 Cluster: Glycogen debranching enzyme, putative; ...    33   5.5  
UniRef50_Q36336 Cluster: Putative orf75 protein; n=1; Chondrus c...    33   7.3  
UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY0154...    33   7.3  
UniRef50_A0E3M4 Cluster: Chromosome undetermined scaffold_77, wh...    33   7.3  
UniRef50_Q7RDL0 Cluster: Putative uncharacterized protein PY0541...    33   9.6  

>UniRef50_Q8IKD7 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2381

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = -3

Query: 327  KKKHYI*CLVGSCLVVHF--NCITLRVCDK*ILLFI-VTKRNASYMCINTMYVIKRNKID 157
            KKK+    L G  +++ F  + I   VC + I LF  + K+N++Y      Y IK NK D
Sbjct: 1269 KKKNNFLHLKGYFILLCFVNDTIIPYVCSELIQLFYYILKKNSTYYKTKNKYYIKHNKED 1328

Query: 156  IYNVN 142
            I N+N
Sbjct: 1329 IQNIN 1333


>UniRef50_A4YGM7 Cluster: Glycogen debranching enzyme, putative;
           n=1; Metallosphaera sedula DSM 5348|Rep: Glycogen
           debranching enzyme, putative - Metallosphaera sedula DSM
           5348
          Length = 611

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +2

Query: 347 SQNHYIQDVFYLDGYRIVFLIQIAYTM*AIL*IKENDFLLSSLSAIGKTYIIHVVYNEV 523
           S NHY+ DVFY +GYR +  ++              DFL  + S + +T ++H  YN +
Sbjct: 69  STNHYLNDVFYPEGYRFLNHVERGEN------FVRWDFLFGN-SRVERTLVVHRGYNAI 120


>UniRef50_Q36336 Cluster: Putative orf75 protein; n=1; Chondrus
           crispus|Rep: Putative orf75 protein - Chondrus crispus
           (Carragheen)
          Length = 75

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 394 YCV-FNSDC-LHYVSNIINQRKRFFVIFIIGYR*NVYYTRSI 513
           YCV FN  C L + SNI+ Q +R+     + Y    YY R+I
Sbjct: 5   YCVQFNQSCWLFFTSNIVRQFRRYIKFHFLCYYIRNYYARNI 46


>UniRef50_Q7RPB6 Cluster: Putative uncharacterized protein PY01543;
            n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01543 - Plasmodium yoelii yoelii
          Length = 1776

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = -2

Query: 526  KHLVVYYVYNIRFTYSR**R*QKIVFFDL*YCLHSVSNLN*KHNTITIQIKYILYIMILR 347
            K  +++  Y  +  Y +    +K++F       +++++L   H T+ + I + LYIM+L 
Sbjct: 1049 KKFIIFKKYKKKMKYYK----KKLIFIFKKIYFYAITSLKKNHFTLNMDIFFSLYIMLLE 1104

Query: 346  KGYYLIQK 323
            K  + IQK
Sbjct: 1105 KINFKIQK 1112


>UniRef50_A0E3M4 Cluster: Chromosome undetermined scaffold_77, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_77, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1741

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -3

Query: 180  VIKRNKIDIYNVNAATHLEIRVLRSQYSYEGCRTL-QVEMHYCFFFIIF 37
            V+  N  DI+N     HLE+      YS +GC+T+ QV+       I F
Sbjct: 1559 VLSNNTCDIFNSELIDHLELEQFLDFYSIQGCQTIGQVQQGISISIINF 1607


>UniRef50_Q7RDL0 Cluster: Putative uncharacterized protein PY05412;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05412 - Plasmodium yoelii yoelii
          Length = 834

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -3

Query: 192 NTMYVIKRNKIDIYNVNAATHLEIR--VLRSQYSYEGCRTLQVEMHYCFFFIIFKR 31
           N   +IK+N+I  +     T   IR  +L  QY     + L++   Y F+F IFK+
Sbjct: 26  NYKEIIKKNEIPTFEDEIRTFTSIRNCILTEQYKGANDKLLRLYKEYLFYFDIFKK 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,999,916
Number of Sequences: 1657284
Number of extensions: 11891565
Number of successful extensions: 25356
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25352
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)