Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1074
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.4  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   4.2  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   4.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 384  MVIVLCF*FRLLTLCKQYYKSKKTIFCYLHY 476
            M+I+L   F +LT+   +YK  +T    L Y
Sbjct: 1627 MIIMLFIGFNMLTMTLDHYKQSETFSAVLDY 1657


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 457 IVFFDL*YCLHSVSNLN*KHNTITIQIKYILY 362
           +VF    +C+H+  + + KH  +  +IK +LY
Sbjct: 94  LVFGGWDFCIHNQKSADIKHRALHNEIKSLLY 125


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 398 QYDNHPDKIHPVYNDFAK 345
           QY NH   IH +Y+D  K
Sbjct: 132 QYRNHLHNIHQLYSDMLK 149


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +1

Query: 22  TASSLENNEEEAVMHFHL-KGAAAFVTILRP*NPYLKVGGGIYVVDVYFITFYYVHS 189
           ++S L ++ E+ V    L K A AF T      PY+  G  + ++D    T  +VHS
Sbjct: 92  SSSLLSSSAEDDVARITLSKDADAFFT------PYIGHGESVRIIDAELGTLEHVHS 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,645
Number of Sequences: 2352
Number of extensions: 13704
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)