Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1067
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    73   9e-13
U92896-1|AAC39577.1|  213|Homo sapiens LERK-6 protein.                 31   6.4  
AJ007292-1|CAA07435.1|  213|Homo sapiens protein ( Homo sapiens ...    31   6.4  
AC004258-2|AAC04896.1|  213|Homo sapiens EPL6_HUMAN protein.           31   6.4  
BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and homeob...    30   8.4  
AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZH...    30   8.4  
AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.     30   8.4  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.3 bits (172), Expect = 9e-13
 Identities = 32/35 (91%), Positives = 33/35 (94%)
 Frame = +2

Query: 149 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC 253
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSC 35


>U92896-1|AAC39577.1|  213|Homo sapiens LERK-6 protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 465 GVLNGDERFRHVTTLTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETI 632
           G L   E+F+  T  +LG + R   +    +  PPN V    +++ V+ R + ET+
Sbjct: 122 GPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPNAVDRPCLRLKVYVRPTNETL 177


>AJ007292-1|CAA07435.1|  213|Homo sapiens protein ( Homo sapiens
           mRNA for ephrin-A2. ).
          Length = 213

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 465 GVLNGDERFRHVTTLTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETI 632
           G L   E+F+  T  +LG + R   +    +  PPN V    +++ V+ R + ET+
Sbjct: 122 GPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPNAVDRPCLRLKVYVRPTNETL 177


>AC004258-2|AAC04896.1|  213|Homo sapiens EPL6_HUMAN protein.
          Length = 213

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 465 GVLNGDERFRHVTTLTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETI 632
           G L   E+F+  T  +LG + R   +    +  PPN V    +++ V+ R + ET+
Sbjct: 122 GPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPNAVDRPCLRLKVYVRPTNETL 177


>BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and
           homeoboxes 2 protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 381 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLTLGTKHRAPADIIDRAP 560
           LG     LT V   S +   S +    AGV N  ++ R + T     + + P   I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 427

Query: 561 LPPNRVSNETMKVVVFQRRSRETISHL 641
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZHX2
           protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 381 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLTLGTKHRAPADIIDRAP 560
           LG     LT V   S +   S +    AGV N  ++ R + T     + + P   I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 427

Query: 561 LPPNRVSNETMKVVVFQRRSRETISHL 641
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.
          Length = 868

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 381 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLTLGTKHRAPADIIDRAP 560
           LG     LT V   S +   S +    AGV N  ++ R + T     + + P   I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPKRPH--IAQVP 458

Query: 561 LPPNRVSNETMKVVVFQRRSRETISHL 641
            PP +V+N  +     +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,007,620
Number of Sequences: 237096
Number of extensions: 2799714
Number of successful extensions: 6931
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6926
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)