Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1064
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 134 1e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 99 8e-22
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 95 1e-20
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 94 2e-20
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 90 4e-19
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 55 1e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 33 0.061
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 29 0.99
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 28 1.7
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 28 1.7
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 4.0
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 26 7.0
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 26 7.0
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 7.0
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.3
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 25 9.3
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 25 9.3
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 134 bits (325), Expect = 1e-32
Identities = 60/85 (70%), Positives = 75/85 (88%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SC+A+MEG+TPKV+ N+EG+RTTPS VAF+K+GERLVG+ AKRQAV N NTF+AT
Sbjct: 58 GTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENTFFAT 117
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRRF +PEVQ+D+K + YK+V
Sbjct: 118 KRLIGRRFKEPEVQRDIKEVPYKIV 142
Score = 84.2 bits (199), Expect = 2e-17
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = +2
Query: 515 SNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
SNGDAW++ GK YSPSQIG F+L KM+ETA YL VKNAV+TVPAYFNDS + K
Sbjct: 145 SNGDAWLEAR-GKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATK AG I+GLNVLRV+NEPTAAA L YG D++
Sbjct: 198 QRQATKAAGAIAGLNVLRVVNEPTAAA-LAYGLDKK 232
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 217 SEGVRGAVIGIDLARQTRALPSWRARHPRWWKTVKGLGRLP 339
+E V+G VIGIDL T L + P+ +G P
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTP 85
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 98.7 bits (235), Expect = 8e-22
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCVAV E +++ N +G+RTTPS VAF+ E ERLVG AK QA N NT +
Sbjct: 14 GTTYSCVAVWETANVEIIPNDQGARTTPSFVAFT-ETERLVGDAAKNQAAMNPRNTVFDA 72
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRR++DPE QKD+K+ +KV+
Sbjct: 73 KRLIGRRYEDPETQKDIKHWPFKVI 97
Score = 53.2 bits (122), Expect = 4e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QR ATKDAG I+GLNVLR+INEPTAAA + YG D +
Sbjct: 156 QRAATKDAGAIAGLNVLRIINEPTAAA-IAYGLDAK 190
Score = 52.0 bits (119), Expect = 9e-08
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDS 676
K ++ +I A VL KMKE +EA LN V+ AVITVPAYF+DS
Sbjct: 114 KQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDS 155
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 94.7 bits (225), Expect = 1e-20
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT +
Sbjct: 10 GTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDA 68
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR+FDDPEVQ DMK+ +KV+
Sbjct: 69 KRLIGRKFDDPEVQSDMKHWPFKVI 93
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
K ++P +I + VL+KM+ETAEAYL V +AV+TVPAYFNDS + K
Sbjct: 110 KTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAG I+GLNVLR+INEPTAAA + YG DR
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAA-IAYGLDR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT +
Sbjct: 10 GTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTIFDA 68
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRRF+DPEVQ DMK+ +KV+
Sbjct: 69 KRLIGRRFNDPEVQSDMKHWPFKVI 93
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
K ++P +I + VL+KM+E+AEA+L V +AV+TVPAYFNDS + K
Sbjct: 110 KTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAG I+GLNVLR+INEPTAAA + YG DR
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAA-IAYGLDR 185
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 89.8 bits (213), Expect = 4e-19
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCVAVM+ +++ N +G+R TPS+VAF+ E ERLVG AK QA +N NT +
Sbjct: 43 GTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFT-EDERLVGEAAKNQAPSNPENTIFDI 101
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR+FD+ + KD+K+ + +V
Sbjct: 102 KRLIGRKFDEKTMAKDIKSFPFHIV 126
Score = 58.8 bits (136), Expect = 8e-10
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 539 GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
G K ++P +I A +L KMK+TAEAYL V +AV+TVPAYFND+ + K
Sbjct: 139 GGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190
Score = 54.8 bits (126), Expect = 1e-08
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAG I+GLNV+R++NEPTAAA + YG D+
Sbjct: 185 QRQATKDAGTIAGLNVIRIVNEPTAAA-IAYGLDK 218
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 54.8 bits (126), Expect = 1e-08
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
G + + +AV + V+ N +R+TPS V++ E R +G AK +N NT +
Sbjct: 13 GNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYG-ERSRFLGEAAKSAEASNFRNTVGSL 71
Query: 435 KRLIGRRFDDPEVQKDMKN 491
KRL GR +DDPE+ KD+++
Sbjct: 72 KRLAGRTYDDPEI-KDIES 89
Score = 33.9 bits (74), Expect = 0.026
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYG 771
QR+A +A I+GLN LR++N+ AAA+L YG
Sbjct: 156 QRRALLEAANIAGLNPLRLMND-NAAAALTYG 186
Score = 32.7 bits (71), Expect = 0.061
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFND 673
+S Q+ A K+K AEA L SV + VI++PA+F D
Sbjct: 116 FSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTD 154
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 32.7 bits (71), Expect = 0.061
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDS 676
K+ + + L ++ E+AE +L T V V++VP YF D+
Sbjct: 136 KILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDA 177
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 28.7 bits (61), Expect = 0.99
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -1
Query: 637 FHTCVQVCFSSFLHLYQHKCTNLARRVYFAISTL----HPGVAIRSPT 506
F+ V F SF Y KCT A V +AIS L + GV ++S T
Sbjct: 387 FYGLDDVIFHSFTRTYGFKCTLSASDVSYAISALLEMGNTGVLLQSKT 434
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 443 DRTSIRRSRSAKGHEEFVIQSSRASNGDAWVQGTDGKVYSPS 568
DR+S+RRS+S K + SR A + G + SPS
Sbjct: 233 DRSSVRRSQSFKNRRNGKPRISRLHTSHASIDGLTDFIQSPS 274
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +2
Query: 494 VIQSSRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFND 673
++++ ++G ++V +D + YS +I A + AE + + + V+TVP +FN+
Sbjct: 115 LVENEETTSGISFVI-SDEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNE 173
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 106 GLSSDLYTQRNFSSILKSNATPTVPIYQRH 195
GL D + + S I ++ PTVPIY+ H
Sbjct: 65 GLKKDELVENSESYINDASFEPTVPIYESH 94
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 597 IFINTNAPIWLGEYTLPSVPCTQASPFEAL 508
IF++T LG+Y++P+ C A+P+ +
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPYSGI 440
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 136 FSAYTSLNLIRCTLNLSAECRVAFNIFITY*NTILFYFQAF 14
+S + + N++ ECR +N+ Y T L Y QAF
Sbjct: 698 YSIFLNNNILPFGHPFVKECRSLYNLACIYSKTRLTYLQAF 738
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 260 RARSIPMTAPRTPSDLFLNCTPCRW*IGTV 171
R + P+ PRT D+ +PC+ +GT+
Sbjct: 571 RRSASPLQHPRTSPDMLDKTSPCKRGLGTI 600
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 151 KLTKNFSAYTSLNLIRC 101
KL K+F +T LNL++C
Sbjct: 603 KLNKDFDDFTPLNLLKC 619
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 243 WNRSGTTNSCVAVMEGKTPKVV--ENSEGSRTTP-SHVAFSKEGERLVGMPAKRQAVTNS 413
W R G V++++ KTP+ + ++ S +TP H++ K P +++N+
Sbjct: 255 WVRHGKLTRSVSLLQHKTPRRIRPKSLSKSNSTPLKHLSAQKPNSNYYTGPPTPVSISNT 314
Query: 414 XNTFYATKRLIGR 452
+ + + R
Sbjct: 315 PENIHPSSSEVRR 327
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1339
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 92 PFGRMPRRVQHLYHVLKYYI 33
PF + + V+ +YH LKYYI
Sbjct: 29 PFKKRHQIVRSIYHGLKYYI 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,373,444
Number of Sequences: 5004
Number of extensions: 71906
Number of successful extensions: 237
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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