Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1064
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 3e-20
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 95 6e-20
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 89 5e-18
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 88 7e-18
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 57 2e-08
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 51 9e-07
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 48 1e-05
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 33 0.34
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 29 3.2
SB_42941| Best HMM Match : ATP1G1_PLM_MAT8 (HMM E-Value=1.3) 29 3.2
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36) 28 7.4
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 28 7.4
SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1) 28 9.8
SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1) 28 9.8
SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7) 28 9.8
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV V + +++ N +G+RTTPS+VAF+ E ERLVG AK Q N NT +
Sbjct: 12 GTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDE-ERLVGDAAKNQVAMNPTNTIFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRRFDDP V+ DMK+ S++VV
Sbjct: 71 KRLIGRRFDDPGVKDDMKHWSFEVV 95
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQKMQVKSLV*MCYE 730
K + +I + VL KMKETAEAYL V +AV+TVPAYFNDS + K +S+ +C+
Sbjct: 137 KTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGESVRGVCWA 196
Query: 731 LS 736
S
Sbjct: 197 RS 198
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG ISGLNVLR+INEPTAAA + YG D++
Sbjct: 247 QRQATKDAGVISGLNVLRIINEPTAAA-IAYGLDKK 281
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 569 QIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
QI + VL KMKETAEAYL V +AV+TVPAYFNDS + K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 95.1 bits (226), Expect = 6e-20
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV V + +++ N +G+R TPS+VAF++EGERL+G AK Q TN NT +
Sbjct: 709 GTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPENTVFDA 768
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR +DD VQ D+K +KVV
Sbjct: 769 KRLIGRSWDDTSVQNDLKFFPFKVV 793
Score = 58.4 bits (135), Expect = 6e-09
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
K ++ +I A VL KMKETAEAYL V +AV+TVPAYFND+ + K
Sbjct: 810 KTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GL V+R+INEPTAAA + YG D++
Sbjct: 852 QRQATKDAGAIAGLTVMRIINEPTAAA-IAYGMDKK 886
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 88.6 bits (210), Expect = 5e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV V + +++ N +G+RTTPS+V F+ + ERLVG AK Q N NT +
Sbjct: 12 GTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVALNPENTIFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRR+DD VQ DMK +K++
Sbjct: 71 KRLIGRRYDDATVQSDMKLWPFKII 95
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
K ++ +I + VL KMKETAEAYL V +AVITVPAYFNDS + K
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAG I+GLNVLRVINEPTAAA L YG D+
Sbjct: 154 QRQATKDAGTIAGLNVLRVINEPTAAA-LAYGLDK 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 88.2 bits (209), Expect = 7e-18
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV V + +++ N +G+RTTPS+VAFS + ERL+G AK Q N NT +
Sbjct: 12 GTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPENTVFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR+FDDP V +DM + + V+
Sbjct: 71 KRLIGRKFDDPVVARDMTHWPFHVI 95
Score = 58.0 bits (134), Expect = 8e-09
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
K + P +I + VL KMKETAEAYL V +AV+TVPAYF+DS + K
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GLNVLR+INEPTAAA + YG D++
Sbjct: 154 QRQATKDAGTIAGLNVLRIINEPTAAA-IAYGLDKK 188
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +3
Query: 282 MEGKTPKVVENSEGSRTTPSHVAFSKEGERL 374
M+GKTPKV+EN+EGSRTTPS VAF+ EGERL
Sbjct: 1 MDGKTPKVIENAEGSRTTPSVVAFTPEGERL 31
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
++P QI A VL ++K AEA+L +VK AVITVPA+FND+ + K
Sbjct: 13 FAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVL 726
QRQATKDAG I+GL+VL
Sbjct: 53 QRQATKDAGTIAGLDVL 69
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKV--VENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFY 428
GTT SCV + + ++ + + PS VAF+ +G LVG A QA N NT Y
Sbjct: 39 GTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEINPKNTIY 97
Query: 429 ATKRLIGRRFDDPEVQKDMKNLSYKV 506
KR IG+ F E+ + K ++V
Sbjct: 98 DAKRFIGKTFTKQELLEIGKLYQFRV 123
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QR AT A ++G+ VLRVINEPTAAA L YG ++
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAA-LAYGLHKK 218
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +2
Query: 488 EFVIQSSRASNGDAWVQGTDGK--VYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPA 661
+F + + + N ++ G G V +P +IG +V+ K++ AE L T+V AV++VPA
Sbjct: 120 QFRVTTDKRGNA-GFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPA 178
Query: 662 YFN 670
F+
Sbjct: 179 EFD 181
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 402 VTNSXNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVGLRMATPGCKV 542
++N NT KR IGR+F DP VQK++ +L YKVV L + G +V
Sbjct: 116 ISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQV 162
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 551 KVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
+V+SP Q+ A + ++K TAE L T V + VI+VP+Y+ D R
Sbjct: 169 EVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRR 213
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 32.7 bits (71), Expect = 0.34
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 249 RSGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLV---GMPAKRQAVTNSXN 419
R+GT + V++G T ++ N G R TP+ VAFS + E+L+ G+P + +N N
Sbjct: 70 RAGTFRTRWPVLDGNTT-IIANDAGDRVTPAMVAFS-DTEKLIDKDGLP-YYEVESNERN 126
Query: 420 TFYATKRLI 446
+ K +I
Sbjct: 127 IQVSPKEVI 135
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
++P ++ +L + E + + +K+ V+TVP +FN + R
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERR 122
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 379 PTRRSPSFEKATWEGVVRDPSLFSTTLGVLPSMTATH 269
PT +PS E W V +P+L++ T G L T T+
Sbjct: 164 PTYGTPSMEPHVWNPNVWNPNLWNLTYGTLSIETPTY 200
>SB_42941| Best HMM Match : ATP1G1_PLM_MAT8 (HMM E-Value=1.3)
Length = 231
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 718 LNQRFDLHL-LWPDAGIIEVSWHCYDCIFHTCVQV 617
LNQ +L L L D +++V Y CI TC QV
Sbjct: 116 LNQLMELRLTLKRDKNLLQVKAGVYSCILRTCTQV 150
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/57 (36%), Positives = 24/57 (42%)
Frame = -2
Query: 357 SRRPHGRESSETLHCFPPPWVSCPP*RQRTSLSCQIDSNDGSTNTLRLVSKLYAMSL 187
S R HG S+ TLH P PP Q S S S+ + NT S L M L
Sbjct: 669 SSRRHGNNSNTTLHTLAPTTHKPPPSNQHNSSSSHRISST-TPNTACTTSNLPRMPL 724
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = +3
Query: 294 TPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYATKRLIGRRFDDPEV 473
TPK E E + +H + ++ P + T T + +F EV
Sbjct: 306 TPKAPEGDESQTLSDTHAVADAKTKQADAQPTSTETATKPVET------PVENKFYPTEV 359
Query: 474 QKDMKNLSYKVVGLRMATPGCKVLMAKYTLRAR 572
KD+ + S + L PG K AKYT+ +
Sbjct: 360 -KDLDDPSSLMSKLIAPAPGDKPQKAKYTIHVK 391
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 286 RARHPRWWKTVKGLGRLPPMWPSRKRASV 372
R R+PR +T +GL + WPSR R +
Sbjct: 10 RLRYPRSIRTQQGLAKELDFWPSRARGRI 38
>SB_6589| Best HMM Match : zf-C2H2 (HMM E-Value=1.2e-36)
Length = 651
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 391 LAGIPTRRSPSFEKATW--EGVVRDPSLFSTTLGVLPSMTATHEFV 260
+A + R F K TW +++DP F + GVL M + + +V
Sbjct: 50 IANSQSSRREDFLKTTWIRHNILQDPKTFEPSSGVLNRMLSANSWV 95
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 431 RVKRVXAIRDRLPFGGHSDQTLALFREGHMGGSRPR----PFTVFHHLGCLALHDGNA 270
RV RV R R P +D + GHMG RP PF + L LAL G A
Sbjct: 209 RVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQLYMLDVLALRKGAA 266
>SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1)
Length = 465
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 304 WWKTVKGLGRLPPMWPSRKR 363
WWK K L P WPS+ R
Sbjct: 335 WWKGPKWLSASPASWPSQTR 354
>SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1)
Length = 454
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = +1
Query: 268 RALPSWRARHPR-----WWKTVKGLGRLPPMWP 351
R+ P WRA+ + +W+ +G GR P WP
Sbjct: 361 RSNPYWRAQQGKGRPNPYWRVQQGKGRSNPYWP 393
>SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -2
Query: 390 WRAFRPDARPLSRR---PHGRESSETLHCFPPPWVSCPP 283
W A PD S R P G+ SE L PP SC P
Sbjct: 27 WTAPDPDIPVYSARARSPRGQRQSENLRTIPPVSNSCSP 65
>SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7)
Length = 577
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 273 VAVMEGKTPKVVENSEGSR---TTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYATKRL 443
V+ GK+P V N +GSR + +A S + + G + S N F T RL
Sbjct: 435 VSAQSGKSPAVNLNFQGSRIFQVSYKSLASSDDVKSAAGEGTAEISPQESTNRFRFTGRL 494
Query: 444 IGRR 455
+G R
Sbjct: 495 LGNR 498
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,924,307
Number of Sequences: 59808
Number of extensions: 565395
Number of successful extensions: 2170
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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