Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1064
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    56   1e-09
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    25   2.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.5  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    24   4.6  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 56.0 bits (129), Expect = 1e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +1

Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
           QRQATKDAG I+GLNV+R+INEPTAAA L YG D+
Sbjct: 14  QRQATKDAGAIAGLNVMRIINEPTAAA-LAYGLDK 47



 Score = 29.5 bits (63), Expect = 0.12
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 638 NAVITVPAYFNDSSVRPQK 694
           +AVITVPAYFNDS  +  K
Sbjct: 1   DAVITVPAYFNDSQRQATK 19


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 263 CRARSIPMTAPRTPSDLFLNC 201
           CRAR +P   P  P  L  NC
Sbjct: 13  CRARPLPSVIPGVPDPLPENC 33


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 443  DRTSIRRSRSAKGHEEFVIQSSRASNGDAW 532
            D TSI R+ + +   + V+   R++ G+AW
Sbjct: 1338 DETSIHRNNNFQTFPQAVLVLFRSATGEAW 1367


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 440 IDRTSIRRSRSAKGHEEFVIQSSRASNG 523
           + R  +RR    KGH E  I SS +S+G
Sbjct: 54  VSRHFVRRYMLPKGHNEADIVSSLSSDG 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 867,080
Number of Sequences: 2352
Number of extensions: 19285
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)