Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1064
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 144 6e-35
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 144 6e-35
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 97 2e-20
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 97 2e-20
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 89 4e-18
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 85 7e-17
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 84 9e-17
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 84 9e-17
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 72 4e-13
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 72 4e-13
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 35 0.057
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.8
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 6.6
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 6.6
U28943-9|AAA68361.2| 325|Caenorhabditis elegans Serpentine rece... 28 6.6
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 6.6
Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical pr... 28 8.7
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 144 bits (349), Expect = 6e-35
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG PAKRQAVTNS NT +AT
Sbjct: 39 GTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFAT 98
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRR++DPEVQKD+K + YK+V
Sbjct: 99 KRLIGRRYEDPEVQKDLKVVPYKIV 123
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +2
Query: 509 RASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRP 688
+ASNGDAWV+ GK Y PSQ+GAFVL+KMKETAE+YL T+V N V+TVPAYFNDS +
Sbjct: 124 KASNGDAWVEA-QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQA 182
Query: 689 QK 694
K
Sbjct: 183 TK 184
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAGQISGLNVLRVINEPTAAA L YG D+
Sbjct: 179 QRQATKDAGQISGLNVLRVINEPTAAA-LAYGLDK 212
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 144 bits (349), Expect = 6e-35
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG PAKRQAVTNS NT +AT
Sbjct: 39 GTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFAT 98
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGRR++DPEVQKD+K + YK+V
Sbjct: 99 KRLIGRRYEDPEVQKDLKVVPYKIV 123
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +2
Query: 509 RASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRP 688
+ASNGDAWV+ GKVYSPSQ+GAFVL+KMKETAE+YL T+V NAV+TVPAYFNDS +
Sbjct: 124 KASNGDAWVEA-QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQA 182
Query: 689 QK 694
K
Sbjct: 183 TK 184
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDAGQISGLNVLRVINEPTAAA L YG D+
Sbjct: 179 QRQATKDAGQISGLNVLRVINEPTAAA-LAYGLDK 212
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 GTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYA 431
GTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT +
Sbjct: 12 GTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTVFD 69
Query: 432 TKRLIGRRFDDPEVQKDMKNLSYKVVGLRMATPGCKV 542
KRLIGR+FDDP VQ DMK+ +KV+ A P +V
Sbjct: 70 AKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = +2
Query: 545 DGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
+ K+++P +I + VL+KMKETAEA+L T+VK+AV+TVPAYFNDS + K
Sbjct: 111 ENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATK 160
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GLNVLR+INEPTAAA + YG D++
Sbjct: 155 QRQATKDAGAIAGLNVLRIINEPTAAA-IAYGLDKK 189
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 GTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYA 431
GTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N NT +
Sbjct: 12 GTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHNTVFD 69
Query: 432 TKRLIGRRFDDPEVQKDMKNLSYKVVGLRMATPGCKV 542
KRLIGR+FDDP VQ DMK+ +KV+ A P +V
Sbjct: 70 AKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = +2
Query: 545 DGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
+ K+++P +I + VL+KMK+TAEA+L +VK+AV+TVP YFNDS + K
Sbjct: 111 ENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATK 160
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GLNVLR+INEPTAAA + YG D++
Sbjct: 155 QRQATKDAGAIAGLNVLRIINEPTAAA-IAYGLDKK 189
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 88.6 bits (210), Expect = 4e-18
Identities = 44/86 (51%), Positives = 59/86 (68%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N NT +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENTVFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVVG 512
KRLIGRRFD+ VQ D+K+ + V G
Sbjct: 71 KRLIGRRFDEETVQSDIKHWPFTVKG 96
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
++ +I A VL KMKETAEA L SV++AVITVPAYFNDS + K
Sbjct: 114 FNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATK 159
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDA I+GLN +R+INEPTAAA L YG D+
Sbjct: 154 QRQATKDAATIAGLNAIRIINEPTAAA-LAYGLDK 187
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 87.4 bits (207), Expect = 1e-17
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N NT +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENTVFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVVG 512
KRLIGRRFD+ VQ D K+ + V G
Sbjct: 71 KRLIGRRFDESTVQSDCKHWPFGVKG 96
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
++P +I A VL KMKETAE YL +VK+AVITVPAYFNDS + K
Sbjct: 114 FNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK 159
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDA I+GLN +R+INEPTAAA L YG D+
Sbjct: 154 QRQATKDAATIAGLNAIRIINEPTAAA-LAYGLDK 187
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 87.4 bits (207), Expect = 1e-17
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N NT +
Sbjct: 12 GTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPENTVFDA 70
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVVG 512
KRLIGRRFD+ VQ D K+ + V G
Sbjct: 71 KRLIGRRFDESTVQSDCKHWPFGVKG 96
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
++P +I A VL KMKETAE YL +VK+AVITVPAYFNDS + K
Sbjct: 114 FNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK 159
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDR 780
QRQATKDA I+GLN +R+INEPTAAA L YG D+
Sbjct: 154 QRQATKDAATIAGLNAIRIINEPTAAA-LAYGLDK 187
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 84.6 bits (200), Expect = 7e-17
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSXNTFYA 431
GTT SCV V + +++ N +G+R TPS+VAFS +GERL+G AK Q N NT +
Sbjct: 38 GTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFD 97
Query: 432 TKRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR +++ VQ+D+K+ +K+V
Sbjct: 98 AKRLIGRFYNEKTVQQDIKHWPFKIV 123
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = +2
Query: 494 VIQSSRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFND 673
++ S N + V G++ K ++P ++ A VL KMK+ AE+YL VKNAV+TVPAYFND
Sbjct: 122 IVDKSNKPNVEVKV-GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFND 180
Query: 674 SSVRPQK 694
+ + K
Sbjct: 181 AQKQATK 187
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
Q+QATKDAG I+GLNV+R+INEPTAAA + YG D++
Sbjct: 182 QKQATKDAGSIAGLNVVRIINEPTAAA-IAYGLDKK 216
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSXNTFYA 431
GTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G AK Q N NT +
Sbjct: 41 GTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFD 100
Query: 432 TKRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR ++D VQ D+K+ +KV+
Sbjct: 101 AKRLIGRDYNDKTVQADIKHWPFKVI 126
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +2
Query: 539 GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
G+D K ++P ++ A VL+KMKE AE+YL VKNAV+TVPAYFND+ + K
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GLNV+R+INEPTAAA + YG D++
Sbjct: 185 QRQATKDAGTIAGLNVVRIINEPTAAA-IAYGLDKK 219
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPAKRQAVTNSXNTFYA 431
GTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G AK Q N NT +
Sbjct: 41 GTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFD 100
Query: 432 TKRLIGRRFDDPEVQKDMKNLSYKVV 509
KRLIGR ++D VQ D+K+ +KV+
Sbjct: 101 AKRLIGRDYNDKTVQADIKHWPFKVI 126
Score = 68.1 bits (159), Expect = 7e-12
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +2
Query: 539 GTDGKVYSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVRPQK 694
G+D K ++P ++ A VL+KMKE AE+YL VKNAV+TVPAYFND+ + K
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATK 190
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QRQATKDAG I+GLNV+R+INEPTAAA + YG D++
Sbjct: 185 QRQATKDAGTIAGLNVVRIINEPTAAA-IAYGLDKK 219
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N+ +
Sbjct: 8 GTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATNSLFDV 66
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKV 506
KR+IGRR+DD +Q+DM +KV
Sbjct: 67 KRIIGRRYDDVLLQRDMPLWPFKV 90
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAA 756
QR+AT++A +I+GL VLR++NEPTAAA
Sbjct: 151 QRRATEEAAEIAGLKVLRILNEPTAAA 177
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
+S + + +L +K AE L VK+AVITVPAYFN + R
Sbjct: 111 FSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRR 153
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
GTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N+ +
Sbjct: 8 GTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATNSLFDV 66
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKV 506
KR+IGRR+DD +Q+DM +KV
Sbjct: 67 KRIIGRRYDDVLLQRDMPLWPFKV 90
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAA 756
QR+AT++A +I+GL VLR++NEPTAAA
Sbjct: 151 QRRATEEAAEIAGLKVLRILNEPTAAA 177
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
+S + + +L +K AE L VK+AVITVPAYFN + R
Sbjct: 111 FSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRR 153
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFYAT 434
G N + V +V+ N TP+ V+F + +R +G+ A++ TN NT
Sbjct: 9 GNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNIKNTVINF 67
Query: 435 KRLIGRRFDDPEVQKDMKNLSYKVVGL 515
K LIGR+F DP Q+ + + KVV L
Sbjct: 68 KHLIGRKFSDPVAQRFIPFIPCKVVKL 94
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYG 771
QR+A A Q +GLN LR++NE TA A L YG
Sbjct: 154 QRRAVLSAIQYAGLNSLRIVNETTAIA-LAYG 184
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNT--SVKNAVITVPAYFND 673
++P Q+ A +L K++ E+ L+ V + V+ VP+YF D
Sbjct: 112 FTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTD 152
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +3
Query: 255 GTTNSCVAVMEGKTPK--VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSXNTFY 428
GTT S + + T + ++ + G ++ PS VAF G L+G A Q N T Y
Sbjct: 41 GTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPKRTIY 100
Query: 429 ATKRLIGRRFD--DPEVQKDMKNLSYKV 506
KR IGR F+ + + D K +K+
Sbjct: 101 DAKRFIGRNFEKNNKDFLSDQKRYPFKI 128
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
QR T A +I+ + V RVI+EPTAAA L YG ++
Sbjct: 189 QRNFTAKAAEIAEMEVRRVISEPTAAA-LAYGLHKK 223
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 563 PSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFND 673
P +IG+ ++ +K A +L ++ VI+ PA FN+
Sbjct: 151 PEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNE 187
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
Y+ + A +L K+ EAY + +VK+ VITVP + N + R
Sbjct: 120 YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERR 162
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
+R+A A +I+GLN+L+++N+ +AAA L YG RR
Sbjct: 160 ERRAIASAAEIAGLNLLQLLNDGSAAA-LNYGVFRR 194
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 557 YSPSQIGAFVLIKMKETAEAYLNTSVKNAVITVPAYFNDSSVR 685
Y+ + A +L K+ EAY + +VK+ VITVP + N + R
Sbjct: 136 YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERR 178
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/36 (47%), Positives = 27/36 (75%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
+R+A A +I+GLN+L+++N+ +AAA L YG RR
Sbjct: 176 ERRAIASAAEIAGLNLLQLLNDGSAAA-LNYGVFRR 210
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 676 QRQATKDAGQISGLNVLRVINEPTAAASLRYGQDRR 783
+R A + A Q++GL VL++IN+ TAAA L +G RR
Sbjct: 176 ERLAVERAAQMAGLTVLQLINDGTAAA-LSHGIFRR 210
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 548 GKVYSPSQIGAFVLIKMKETAEAYLNTS-VKNAVITVPAYF 667
G+ Y+ + A +L K+ E Y + +K+ VITVP YF
Sbjct: 132 GESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYF 172
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 224 PSDLFLNCTPCRW*IGTVGVALLFKIDEKFLCVYKSELNPVHSKPF 87
PS + + PC+ + G +L KI C S+L +H PF
Sbjct: 108 PSLAYSHLNPCKSNMSVDGATILNKIWNPHACFVNSKLANIHESPF 153
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 291 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 413
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 216 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 256
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 291 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 413
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 229 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 269
>U28943-9|AAA68361.2| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 59 protein.
Length = 325
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -1
Query: 631 TCVQVCFSSFLHLYQHKCTNLARRVYFAISTLHPGVAIRSPTTLYDKFFMSFCTS 467
+CVQ+ +F L QH+ L + A+ +L P + SPTT + + + TS
Sbjct: 53 SCVQIALITFAFLSQHRL--LTNSISAAVLSLGP-CSYVSPTTCFINYHVFMATS 104
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 291 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 413
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 217 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 257
>Z81072-8|CAE17783.1| 143|Caenorhabditis elegans Hypothetical
protein F30A10.12 protein.
Length = 143
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/96 (21%), Positives = 45/96 (46%)
Frame = +2
Query: 323 VSDDSLPCGLLERGRASGRNARQTASGHE*R*HVLRDEEIDRTSIRRSRSAKGHEEFVIQ 502
VS + P + A G +++ G+E + +DE+ + + ++K ++ +
Sbjct: 50 VSSPAAPASTIST--APGDVSKEKDKGNEEKKEEKKDEKEEEKKDEKKETSKKSKKASKK 107
Query: 503 SSRASNGDAWVQGTDGKVYSPSQIGAFVLIKMKETA 610
S + S+ +G DG+ + + A L+K+ ETA
Sbjct: 108 SVKKSSKSKKNEGDDGEYENVKDMTASELLKIAETA 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,882,205
Number of Sequences: 27780
Number of extensions: 416711
Number of successful extensions: 1296
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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