Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1062
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.        23   4.8  
AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.      23   4.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   8.4  

>DQ370035-1|ABD18596.1|   93|Anopheles gambiae defensin protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 201 AFQIFRIGCVIAASFTTISFQFFCRIPT 118
           A  +  + C IA S TT++ Q  C++ T
Sbjct: 19  AAAVIALICAIAVSGTTVTLQSTCKLFT 46


>AY973195-1|AAY41589.1|   80|Anopheles gambiae defensin 2 protein.
          Length = 80

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 201 AFQIFRIGCVIAASFTTISFQFFCRIPT 118
           A  +  + C IA S TT++ Q  C++ T
Sbjct: 6   AAAVIALICAIAVSGTTVTLQSTCKLFT 33


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 171 IAASFTTISFQFFCRIPTTVPSV 103
           +A++F T+S+   C +  T P V
Sbjct: 815 VASAFQTVSYDAACVVANTTPLV 837


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 348 CRTCSVKPDSRQHRRVS--TNQPARSIGKP 265
           C++CS+ P S +   VS   + P RS  +P
Sbjct: 346 CKSCSISPVSDRSESVSPVPSLPVRSSPEP 375


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,142
Number of Sequences: 2352
Number of extensions: 7096
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)