Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1061
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49073-2|CAA88887.1|  157|Caenorhabditis elegans Hypothetical pr...    62   4e-10
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ...    32   0.48 
AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    31   0.84 
U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z75531-7|CAA99798.2|  316|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U39852-8|AAK39261.2|  113|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical ...    29   3.4  
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AC024200-8|AAF36009.2|  184|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical p...    28   5.9  

>Z49073-2|CAA88887.1|  157|Caenorhabditis elegans Hypothetical
           protein ZK970.3 protein.
          Length = 157

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
 Frame = +1

Query: 1   LKSYTTRLKEDVKSMLENFEEIIKLAKVENE-----SQLNRMTQIEQDTFEMQVRAANIV 165
           +  +  RL++++KS+ +NF  II+ AKV  +     +Q  +MT+      EM VRA  +V
Sbjct: 24  IDEFKRRLRDNIKSLNDNFFHIIQAAKVNPDDNAYKNQTGKMTEFYTTKNEMAVRAQLMV 83

Query: 166 RAGESLMKLVSDIKQYLILNDF 231
           RA + L+KL +D+K++LIL+DF
Sbjct: 84  RASDELLKLTADLKEFLILHDF 105


>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
            protein Y113G7C.1 protein.
          Length = 1494

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
 Frame = +1

Query: 25   KEDVKSMLENFEEIIKLA---KVENESQLNRMTQIEQD-----TFEMQVRAANIVRAGES 180
            KED K   E+ E+I KLA   K   E  L R  + E+D       E  V+  N  RA E 
Sbjct: 1083 KEDAKKAKEDQEKIDKLAAEVKEREEKSLARHEKEEEDEKRRLKEEEDVKQLNKERAMER 1142

Query: 181  LMKLVSDIKQYLILND 228
              +L+ D+K ++I  D
Sbjct: 1143 EEQLIGDMKVWIISQD 1158


>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 434 LVLYVLKINDHCKYQICLCCLPTIKISLYCIIETSCSINT 553
           L  Y+ ++  + K Q  L CLPTI +S++ +  T  S++T
Sbjct: 7   LFTYLGEMGKYQKIQFFLVCLPTIVVSMHALSWTFASVDT 46


>U61954-5|AAK29812.1|  575|Caenorhabditis elegans Hypothetical
           protein F41H10.4 protein.
          Length = 575

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 55  FEEIIKLAKVENESQLNRMTQIEQDTFEMQVRAANIVRAGESLMKLVSDIKQYLILNDFP 234
           FEE+ K    +NE+  N+M+       E +      V   +  +K ++D K  L     P
Sbjct: 95  FEEL-KTISTQNETLKNQMSSYSDHPLEKEAEERQTVEQLKEAIKNLTDEKVLLCQETIP 153

Query: 235 SVNEAIT----KIQNCFVQN 282
           +++  +T    +++NC   N
Sbjct: 154 AISNKVTSLSEELENCQTLN 173


>Z75531-7|CAA99798.2|  316|Caenorhabditis elegans Hypothetical
           protein C54D10.8 protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +1

Query: 1   LKSYTTRLKEDVKSMLENFEEI--IKLAKVENESQLNRMTQIEQDTFEMQVRAANIVRAG 174
           LK  T R  E +   LE   E+  IK+AK+ N+   N+    EQD        A   RA 
Sbjct: 84  LKQETKRSLEKMDEDLERSRELHRIKIAKINNQFMQNKKDFAEQDANRKLEILAQEERAQ 143

Query: 175 ESLMKLVSDIKQYL 216
           E L ++   + + L
Sbjct: 144 ERLREIEDQLARDL 157


>U39852-8|AAK39261.2|  113|Caenorhabditis elegans Hypothetical
           protein K10C2.6 protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = -2

Query: 188 FISDSPALTILAALTCISNVSCSICVILFN*DSFSTFANFMISSKFSNMLLTSSFNLVVY 9
           F++ + +++    LT  S   CSI   +     +STFANF+   +F N L + +F   ++
Sbjct: 33  FLNFTNSVSFSEILTVASIKLCSIFSKIILNIFYSTFANFVFWFQFENSLKSEAFKFTLF 92


>AC025716-3|AAK39618.1|  690|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.10 protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +1

Query: 22  LKEDVKSMLENFEEIIKLAKVENESQLNRMTQIEQDTFEMQVRAANIV-RAGESLMKLVS 198
           +++  +  L+N  E ++  + ENE   +R+  +E++  E  +   +IV R  E  ++L  
Sbjct: 145 IRQCAQFALDNCNEELEKTQTENEEHESRIETLEREVCEKDIAMKDIVERKDEISLQLEL 204

Query: 199 DIKQYL-ILND 228
             K++   LND
Sbjct: 205 QTKEFTSALND 215


>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
           protein ZK430.5 protein.
          Length = 1276

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 140 ISNVSCSICVILFN*DSFST--FANFMISSKFSNMLL 36
           + + +C+ICVI  +  SF+T    +FMI S FS + +
Sbjct: 466 VLSCTCNICVIYHSSSSFATEYMMSFMIYSNFSQLAI 502


>AC024200-8|AAF36009.2|  184|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.14 protein.
          Length = 184

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 494 LPTIKISLYCIIETSCSINTDLKI 565
           L T+KI  YC++++ C+I   +KI
Sbjct: 52  LATVKIGKYCVLKSRCNIRPCMKI 75


>Z81030-17|CAB02706.2|   72|Caenorhabditis elegans Hypothetical
           protein C01G10.4 protein.
          Length = 72

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 583 YQYLNLNFKISIYATTSFNNAIQTYFYCW 497
           Y Y N N     Y    +NN   TY+Y W
Sbjct: 42  YYYPNNNNNGYYYNNNGYNNGYNTYYYTW 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,661,192
Number of Sequences: 27780
Number of extensions: 223992
Number of successful extensions: 649
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)