Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1060
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.5  
AY063775-1|AAL59657.1|   27|Anopheles gambiae glutathione S-tran...    23   5.8  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    23   5.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 345  NTLHTSSSDTYSLHSGTQFRKHC*SAVY*SPGHKRSR 455
            NT  +SSS   S HSGT   K   +    SPG K+ R
Sbjct: 966  NTNSSSSSGKKSSHSGTNSSKRKKTV---SPGEKKDR 999


>AY063775-1|AAL59657.1|   27|Anopheles gambiae glutathione
           S-transferase 1-7 protein.
          Length = 27

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 552 SPLQYYLPPPAWCRKTV 602
           +P+ YYLPP   CR  +
Sbjct: 2   TPVLYYLPPSPPCRSVL 18


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 552 SPLQYYLPPPAWCRKTV 602
           +P+ YYLPP   CR  +
Sbjct: 2   TPVLYYLPPSPPCRSVL 18


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,880
Number of Sequences: 2352
Number of extensions: 14591
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)