Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1060
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36857-1|AAC47002.1| 2029|Drosophila melanogaster protein tyrosi...    29   4.9  
M27700-1|AAA28668.1| 2029|Drosophila melanogaster protein ( D.me...    29   4.9  
AY051985-1|AAK93409.1| 1597|Drosophila melanogaster LD45391p pro...    29   4.9  
AE014134-3149|AAF53837.3| 2029|Drosophila melanogaster CG10443-P...    29   4.9  
AY089392-1|AAL90130.1|  262|Drosophila melanogaster AT21561p pro...    28   8.6  
AE014134-1159|AAN10597.1|  262|Drosophila melanogaster CG31910-P...    28   8.6  

>U36857-1|AAC47002.1| 2029|Drosophila melanogaster protein tyrosine
            phosphatase DLAR protein.
          Length = 2029

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 252  FITTDTIKGRMRKHKRESRAIAAGLPRQDHFNTLHTSSSDTY 377
            F+T D + GR +  +  +  IAA  P++    T H  S D Y
Sbjct: 1261 FLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHLGSGDDY 1302


>M27700-1|AAA28668.1| 2029|Drosophila melanogaster protein (
            D.melanogaster proteintyrosine phosphatase (DLAR) mRNA,
            complete cds. ).
          Length = 2029

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 252  FITTDTIKGRMRKHKRESRAIAAGLPRQDHFNTLHTSSSDTY 377
            F+T D + GR +  +  +  IAA  P++    T H  S D Y
Sbjct: 1261 FLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHLGSGDDY 1302


>AY051985-1|AAK93409.1| 1597|Drosophila melanogaster LD45391p
           protein.
          Length = 1597

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 252 FITTDTIKGRMRKHKRESRAIAAGLPRQDHFNTLHTSSSDTY 377
           F+T D + GR +  +  +  IAA  P++    T H  S D Y
Sbjct: 829 FLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHLGSGDDY 870


>AE014134-3149|AAF53837.3| 2029|Drosophila melanogaster CG10443-PA
            protein.
          Length = 2029

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 252  FITTDTIKGRMRKHKRESRAIAAGLPRQDHFNTLHTSSSDTY 377
            F+T D + GR +  +  +  IAA  P++    T H  S D Y
Sbjct: 1261 FLTDDLLPGRNKPERPNAPYIAAKFPQRSIPFTFHLGSGDDY 1302


>AY089392-1|AAL90130.1|  262|Drosophila melanogaster AT21561p
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 465 HRYANVFYRTSRGCTQYYAAFPALKKGQESP 557
           ++  N     ++ C ++YAA+  L K QE+P
Sbjct: 128 NKMKNTLLEINQQCKEFYAAYERLDKAQETP 158


>AE014134-1159|AAN10597.1|  262|Drosophila melanogaster CG31910-PA
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 465 HRYANVFYRTSRGCTQYYAAFPALKKGQESP 557
           ++  N     ++ C ++YAA+  L K QE+P
Sbjct: 128 NKMKNTLLEINQQCKEFYAAYERLDKAQETP 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,068,854
Number of Sequences: 53049
Number of extensions: 590585
Number of successful extensions: 1430
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)