Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1058
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   5.7  
AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P...    29   5.7  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    29   5.7  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   5.7  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   5.7  
AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p pro...    28   10.0 
AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p pro...    28   10.0 
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    28   10.0 
AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA...    28   10.0 

>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -3

Query: 639 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 517
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
            isoform E protein.
          Length = 2403

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 1440 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 6247 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 1440 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 6247 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


>AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p
           protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 398 TRACLNFFTLTFRALGRNHIASTPARAIAMLCFN*TVGFPLSVPVL 261
           T AC+ + T+ F  +G  +IA+   +  A +     VGF L   VL
Sbjct: 17  TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62


>AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p
           protein.
          Length = 767

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 497 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTF 363
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTF 580


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 626 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 531
           +P++ +   S Y A  +S+S+G  +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184


>AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA
           protein.
          Length = 767

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 497 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTF 363
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTF 580


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,536,700
Number of Sequences: 53049
Number of extensions: 662857
Number of successful extensions: 2018
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)