Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1053
         (966 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve...    74   5e-12
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    73   1e-11
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu...    55   3e-06
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    52   2e-05
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep...    43   0.014
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa...    42   0.031
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0...    42   0.031
UniRef50_UPI000065CC01 Cluster: Tyrosine-protein kinase SgK269 (...    34   6.3  

>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 123

 Score = 74.1 bits (174), Expect = 5e-12
 Identities = 36/57 (63%), Positives = 41/57 (71%)
 Frame = -1

Query: 366 RANPYSEVTDXICRLPXPTLFYXLEALHLGDLLRIWVQPXRHLXVXPSPEFSRSAES 196
           RANP+ EVTD  CRLP PTLFY  EA HLGDLLR+ V+P   + V   PEFSR+ ES
Sbjct: 66  RANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVRPDTKINVF--PEFSRAVES 120


>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome D of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 144

 Score = 72.9 bits (171), Expect = 1e-11
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -1

Query: 372 VXRANPYSEVTDXICRLPXPTLFYXLEALHLGDLLRIWVQPXRHLXVXPSPEFSRSAESI 193
           + RANPY EVTD  CRLP  TLFY LEA+HLGDLLR+ V+P   +   PS  FSR+    
Sbjct: 64  ILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPG--MKTIPSCGFSRAVAGA 121

Query: 192 RTPPQ-MRCSSRSEP 151
             P Q +  SS   P
Sbjct: 122 PDPAQGLGSSSHKTP 136


>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
           Euteleostomi|Rep: RRNA promoter binding protein - Rattus
           norvegicus (Rat)
          Length = 295

 Score = 54.8 bits (126), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 39/77 (50%)
 Frame = -1

Query: 294 EALHLGDLLRIWVQPXRHLXVXPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRT 115
           EA+HLGDLLRIWV+P       P P+F   A + RTPP+ R   R  P        G   
Sbjct: 181 EAVHLGDLLRIWVRPGARFTPSP-PDFQGPARAHRTPPEPRRFPRHGPLSRGEPIPGRPA 239

Query: 114 LRQKRKLFPDLSAASSG 64
           L ++++  P   A  SG
Sbjct: 240 LHKEKRTLPGAPAGFSG 256



 Score = 36.3 bits (80), Expect = 1.2
 Identities = 29/72 (40%), Positives = 30/72 (41%)
 Frame = -2

Query: 365 EPILIPKLRIXFADFHXLHYSXD*RLFTLETCCGYGYNXXDISTYXPHLNFQGPQRVSGH 186
           EPILIPKLRI  ADF  LH S       L              T  P  +FQGP R   H
Sbjct: 157 EPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTPSPP-DFQGPAR--AH 213

Query: 185 RRKCGALRVPNH 150
           R      R P H
Sbjct: 214 RTPPEPRRFPRH 225


>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 52.4 bits (120), Expect = 2e-05
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -3

Query: 364 SQSLFRSYGSNLPTSIXYIILXTRGSSPWRPAADMG 257
           SQS  RSYGS LPTS+ YI+  TRG SPWRP A +G
Sbjct: 226 SQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDAFVG 261


>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
           receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
           acetyl choline receptor - Acheta domesticus (House
           cricket)
          Length = 39

 Score = 42.7 bits (96), Expect = 0.014
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = -1

Query: 348 EVTDXICRLPXPTLFYXLEALHLG 277
           EVTD ICRLP PT  Y L+ALHLG
Sbjct: 16  EVTDPICRLPLPTFVYRLDALHLG 39


>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
           Aa1-330 - Rattus norvegicus (Rat)
          Length = 151

 Score = 41.5 bits (93), Expect = 0.031
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -2

Query: 293 RLFTLETCCGYGYNXXDISTYXPHLNFQGPQRVSGHRRKCGALR 162
           RLFTLETCCGYGY         P + F+G + ++G RR   A +
Sbjct: 25  RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQ 67


>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
           LRRG00134 - Rattus norvegicus (Rat)
          Length = 221

 Score = 41.5 bits (93), Expect = 0.031
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -2

Query: 293 RLFTLETCCGYGYNXXDISTYXPHLNFQGPQRVSGHRRKCGALR 162
           RLFTLETCCGYGY         P + F+G + ++G RR   A +
Sbjct: 95  RLFTLETCCGYGYGPARDLHPLPRI-FKGQRELTGRRRNRDAFQ 137


>UniRef50_UPI000065CC01 Cluster: Tyrosine-protein kinase SgK269 (EC
           2.7.10.2) (Sugen kinase 269).; n=1; Takifugu
           rubripes|Rep: Tyrosine-protein kinase SgK269 (EC
           2.7.10.2) (Sugen kinase 269). - Takifugu rubripes
          Length = 1791

 Score = 33.9 bits (74), Expect = 6.3
 Identities = 19/81 (23%), Positives = 32/81 (39%)
 Frame = -1

Query: 264 IWVQPXRHLXVXPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPD 85
           +W          P  EF   +    + P   CS +S P  P  G   +RT+  K     +
Sbjct: 557 VWTSSTSPRQKIPKGEFGLRSHPGPSSPIHPCSHKSAPTSPIAGLSSSRTVPVKSPNLSE 616

Query: 84  LSAASSGHFGLPRRTLVFKDE 22
           +   S  + G+P   ++ +DE
Sbjct: 617 IKFNSFNNAGMPPFPIIIRDE 637


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,227,624
Number of Sequences: 1657284
Number of extensions: 8098618
Number of successful extensions: 18553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18550
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89815291940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)