Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1053
         (966 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide rec...    29   9.6  
BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p pro...    29   9.6  
AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-P...    29   9.6  

>DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide
           receptor protein.
          Length = 758

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 185 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 9
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 8   KR 3
           K+
Sbjct: 572 KQ 573


>BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p
           protein.
          Length = 758

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 185 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 9
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 8   KR 3
           K+
Sbjct: 572 KQ 573


>AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-PA,
           isoform A protein.
          Length = 758

 Score = 29.1 bits (62), Expect = 9.6
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -2

Query: 185 RRKCGALRVPNHISLL*DSMELERSGR-KENSSRTSRRRLQATLGYPVEHSFLKTRERLL 9
           R  CG LR  +++++   +    +S    +NSSR S       + Y  EH+ L+    +L
Sbjct: 512 RSCCGRLRYYDNVAIASSTTSTRKSSHYHQNSSRKSPSSKGNAVSYIYEHNSLRRHNMML 571

Query: 8   KR 3
           K+
Sbjct: 572 KQ 573


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,451,961
Number of Sequences: 53049
Number of extensions: 379921
Number of successful extensions: 781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4833091908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)