Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1050
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.38 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.2  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   8.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 10/45 (22%), Positives = 25/45 (55%)
 Frame = -3

Query: 558 LLLMCLTSDTVMDLCLRYQYFRFLTYIFARIIRIHLWIYLYGHVM 424
           LL  C+    ++ LC+ Y Y+ F+ +    ++ + ++ + Y H++
Sbjct: 226 LLFYCVL---IILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLL 267


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 519 LCLR-YQYFRFLTYIFARIIRIHLWIYLY 436
           LCL  Y YF +L+YI+    R    I+ Y
Sbjct: 80  LCLPFYSYFFYLSYIYTTYSRKLSGIFKY 108


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 519 LCLR-YQYFRFLTYIFARIIRIHLWIYLY 436
           LCL  Y YF +L+YI+    R    I+ Y
Sbjct: 36  LCLPFYSYFFYLSYIYTTYSRKLSGIFKY 64


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 270 LLYHTLFLRSLPSYTYRPSRNPSISS*VYLFLYIL 374
           L Y    L++  S+     RN S+   VY+ LYIL
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 270 LLYHTLFLRSLPSYTYRPSRNPSISS*VYLFLYIL 374
           L Y    L++  S+     RN S+   VY+ LYIL
Sbjct: 114 LQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 258 SPSILLYHTLFLRSLPSYTYRPSRN 332
           SP++ L H +     PS++  PS N
Sbjct: 333 SPNLPLTHNIAHNPYPSHSIYPSSN 357


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 257 FSFHTPVSYTISSLTPLL-HISSFTQS 334
           + FH   + T+ +LTP L +IS   QS
Sbjct: 448 YGFHNVTNTTLQNLTPQLNYISMKLQS 474


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 186 LNGYGFIIHSPTPLPVTLGSA*HFSPSIL 272
           L+  GF+I +    P  +G   HF P  L
Sbjct: 26  LSALGFLIIAGCVSPFVIGYVKHFHPLAL 54


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 520 FMPQISVLQVSYLYICKNNPYP 455
           F  Q S +   Y Y   +NPYP
Sbjct: 237 FSKQASEILNEYFYSHLSNPYP 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,990
Number of Sequences: 336
Number of extensions: 3287
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)