Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1047
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    20   9.3  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -1

Query: 341 YG*IKNTNHIFIHIIPQGTPYILIPFIVILKPSEILFD 228
           YG   N  HI I  I       L PF V+  P+  L D
Sbjct: 359 YGDFHNMGHILIGYIHDPDHRFLEPFGVMADPAVDLRD 396


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 332 IKNTNHIFIHIIPQGTPYILIPFIVIL 252
           IKNT      + P+   Y ++ F+V++
Sbjct: 79  IKNTEPGMFRVAPELLGYSVVVFVVVM 105


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 317 HIFIHIIP 294
           HIF+HI+P
Sbjct: 60  HIFMHIVP 67


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 337 PYNINLSHRGIDKDTDIVKCLVLVKIYG 420
           P  + + H G     +  K  VLV IYG
Sbjct: 21  PQRLRIRHHGDKPPQERPKVPVLVWIYG 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,935
Number of Sequences: 336
Number of extensions: 1121
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)