Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1036
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   1.4  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    25   1.9  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   4.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   4.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.7  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   7.7  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 168 ASCINESANARGEAVCVLGALPLPRSLTRALGRSAAASGISSLK 299
           A+C  ++A  +   V  + A+  PRS+      +AA  G+  L+
Sbjct: 654 ANCAQKAAQMQAAVVAGVSAVGAPRSMHTTSLSAAAGIGVDDLR 697


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 340 LRYPLILWITVLPPLSELIP 281
           +RY  +LW+ +L  +S L+P
Sbjct: 4   VRYHFVLWLLILIGVSSLVP 23


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 325 ILWITVLPPLSELIPLAAAERPSARVSE 242
           IL   V+PPLS   PL  A  PS + +E
Sbjct: 474 ILLSEVVPPLSLPPPLTGAMLPSVQSAE 501


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 156 ETCRASCINESANARGEAVC 215
           + CR S  +E  + RG+ VC
Sbjct: 549 DACRMSNASEECSGRGQCVC 568


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 194 VGRFINAAGTTGFPT-GKRAVSATQLM*VSSLIR 96
           +GR  NAAGT G  T  KR     + M  S++++
Sbjct: 128 MGRIYNAAGTIGILTRNKRGAIRFEQMQESAVLK 161


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 147 SSRETCRASCINESANARGEAV 212
           SSR TCR +C  +      EAV
Sbjct: 161 SSRNTCRRNCYQQCIYEELEAV 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,454
Number of Sequences: 2352
Number of extensions: 10093
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)