Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1036
         (502 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    30   1.5  
AE013599-1244|AAS64915.1|  253|Drosophila melanogaster CG13214-P...    30   1.5  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    30   1.5  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 ALPLPRSLTRALGRSAAASGISSLKGG 305
           ALP P  +  A+ +S AA GIS L GG
Sbjct: 136 ALPTPPPIPEAIAKSLAAQGISILPGG 162


>AE013599-1244|AAS64915.1|  253|Drosophila melanogaster CG13214-PB,
           isoform B protein.
          Length = 253

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 ALPLPRSLTRALGRSAAASGISSLKGG 305
           ALP P  +  A+ +S AA GIS L GG
Sbjct: 208 ALPTPPPIPEAIAKSLAAQGISILPGG 234


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 225 ALPLPRSLTRALGRSAAASGISSLKGG 305
           ALP P  +  A+ +S AA GIS L GG
Sbjct: 208 ALPTPPPIPEAIAKSLAAQGISILPGG 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,117,216
Number of Sequences: 53049
Number of extensions: 470739
Number of successful extensions: 1358
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)