Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1035
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein. 116 7e-26
L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit pro... 116 7e-26
BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin) ... 116 7e-26
BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin) ... 116 7e-26
BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin) ... 116 7e-26
BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin) ... 116 7e-26
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 30 7.5
>L39793-1|AAA82869.1| 876|Homo sapiens nuclear factor p97 protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (276), Expect = 2e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>L38951-1|AAC41763.1| 876|Homo sapiens importin beta subunit
protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (277), Expect = 1e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>BT009797-1|AAP88799.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (277), Expect = 1e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>BC036703-1|AAH36703.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (277), Expect = 1e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>BC024045-1|AAH24045.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (277), Expect = 1e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>BC003572-1|AAH03572.1| 876|Homo sapiens karyopherin (importin)
beta 1 protein.
Length = 876
Score = 116 bits (279), Expect = 7e-26
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHV 75
P LV NV + STE KE+TLEAIGYICQDID E L ++SN+ILTAII GMR EPSN+V
Sbjct: 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNV 190
Query: 74 RLAATQALLNSLEFFRANFEKKKK 3
+LAAT ALLNSLEF +ANF+K+ +
Sbjct: 191 KLAATNALLNSLEFTKANFDKESE 214
Score = 115 bits (277), Expect = 1e-25
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
GNSQVAR+AAGLQ+KN LTSKDP +K QYQQRWLA+ + R +K +L +GTE RPS
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPS 107
Query: 322 SAAQCVAYVAVAELPVGQWNDLI 254
SA+QCVA +A AE+PV QW +LI
Sbjct: 108 SASQCVAGIACAEIPVNQWPELI 130
Score = 39.9 bits (89), Expect = 0.007
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVL 511
VSPDR ELEAA ++L+ AA N TF+ LS VL
Sbjct: 11 VSPDRLELEAAQKFLERAAVENLPTFLVELSRVL 44
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
protein.
Length = 1264
Score = 29.9 bits (64), Expect = 7.5
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 602 IEMNWKQQLDTSTMLPPQISQHSSKCCPMSFSRW*QSSG*DGSWFAIEKS 453
IE W+ +T PP++ +S CCP S S + SSG GS A+E +
Sbjct: 141 IESPWQPAGRAATPFPPEVGVRTSTCCP-SPSPFRPSSG--GSVAAMESA 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,448,827
Number of Sequences: 237096
Number of extensions: 1560047
Number of successful extensions: 7135
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7132
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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