Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1035
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p pro... 122 3e-28
AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin bet... 122 3e-28
AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA... 122 3e-28
AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin bet... 115 6e-26
AY061359-1|AAL28907.1| 306|Drosophila melanogaster LD28549p pro... 36 0.043
AE014296-2181|AAF49888.1| 255|Drosophila melanogaster CG10973-P... 36 0.043
AE014296-2180|ABC66152.1| 306|Drosophila melanogaster CG10973-P... 36 0.043
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr... 32 0.71
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 32 0.71
>AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p
protein.
Length = 884
Score = 122 bits (295), Expect = 3e-28
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -2
Query: 499 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 320
NS VARMAAGLQLKNHLTSKD + QQYQ RW ++R IK NILAA+GTEN+RPS
Sbjct: 55 NSAVARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSC 114
Query: 319 AAQCVAYVAVAELPVGQWNDLIQFL 245
AAQCVAYVAV ELP+ +W LIQ L
Sbjct: 115 AAQCVAYVAVIELPINRWPMLIQTL 139
Score = 106 bits (254), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -1
Query: 248 LVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRL 69
LV VV S+E+ +E+ LEAIGYICQDI V+ +SN +LTAIIHGMR EPSNHVRL
Sbjct: 139 LVNKVVSEGSSEMHRESALEAIGYICQDIRFGVMENQSNDVLTAIIHGMRKVEPSNHVRL 198
Query: 68 AATQALLNSLEFFRANFEK 12
AAT AL NSLEF ++NFEK
Sbjct: 199 AATTALHNSLEFTKSNFEK 217
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLL 508
VSPD+NEL +A +L+ AA +N F+K LS++L+
Sbjct: 17 VSPDKNELLSAKNFLEQAAASNLPEFLKALSEILV 51
>AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 122 bits (295), Expect = 3e-28
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -2
Query: 499 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 320
NS VARMAAGLQLKNHLTSKD + QQYQ RW ++R IK NILAA+GTEN+RPS
Sbjct: 55 NSAVARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSC 114
Query: 319 AAQCVAYVAVAELPVGQWNDLIQFL 245
AAQCVAYVAV ELP+ +W LIQ L
Sbjct: 115 AAQCVAYVAVIELPINRWPMLIQTL 139
Score = 106 bits (254), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -1
Query: 248 LVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRL 69
LV VV S+E+ +E+ LEAIGYICQDI V+ +SN +LTAIIHGMR EPSNHVRL
Sbjct: 139 LVNKVVSEGSSEMHRESALEAIGYICQDIRFGVMENQSNDVLTAIIHGMRKVEPSNHVRL 198
Query: 68 AATQALLNSLEFFRANFEK 12
AAT AL NSLEF ++NFEK
Sbjct: 199 AATTALHNSLEFTKSNFEK 217
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLL 508
VSPD+NEL +A +L+ AA +N F+K LS++L+
Sbjct: 17 VSPDKNELLSAKNFLEQAAASNLPEFLKALSEILV 51
>AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA
protein.
Length = 884
Score = 122 bits (295), Expect = 3e-28
Identities = 59/85 (69%), Positives = 66/85 (77%)
Frame = -2
Query: 499 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 320
NS VARMAAGLQLKNHLTSKD + QQYQ RW ++R IK NILAA+GTEN+RPS
Sbjct: 55 NSAVARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSC 114
Query: 319 AAQCVAYVAVAELPVGQWNDLIQFL 245
AAQCVAYVAV ELP+ +W LIQ L
Sbjct: 115 AAQCVAYVAVIELPINRWPMLIQTL 139
Score = 106 bits (254), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -1
Query: 248 LVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRL 69
LV VV S+E+ +E+ LEAIGYICQDI V+ +SN +LTAIIHGMR EPSNHVRL
Sbjct: 139 LVNKVVSEGSSEMHRESALEAIGYICQDIRFGVMENQSNDVLTAIIHGMRKVEPSNHVRL 198
Query: 68 AATQALLNSLEFFRANFEK 12
AAT AL NSLEF ++NFEK
Sbjct: 199 AATTALHNSLEFTKSNFEK 217
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLL 508
VSPD+NEL +A +L+ AA +N F+K LS++L+
Sbjct: 17 VSPDKNELLSAKNFLEQAAASNLPEFLKALSEILV 51
>AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 115 bits (276), Expect = 6e-26
Identities = 57/85 (67%), Positives = 64/85 (75%)
Frame = -2
Query: 499 NSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSS 320
NS VARMAAGLQLKNHLT KD + QQYQ RW ++R IK NILAA+GTEN+RPS
Sbjct: 55 NSAVARMAAGLQLKNHLTRKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSC 114
Query: 319 AAQCVAYVAVAELPVGQWNDLIQFL 245
AAQCVAYVAV ELP+ + LIQ L
Sbjct: 115 AAQCVAYVAVIELPINRRPMLIQTL 139
Score = 106 bits (254), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -1
Query: 248 LVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRL 69
LV VV S+E+ +E+ LEAIGYICQDI V+ +SN +LTAIIHGMR EPSNHVRL
Sbjct: 139 LVNKVVSEGSSEMHRESALEAIGYICQDIRFGVMENQSNDVLTAIIHGMRKVEPSNHVRL 198
Query: 68 AATQALLNSLEFFRANFEK 12
AAT AL NSLEF ++NFEK
Sbjct: 199 AATTALHNSLEFTKSNFEK 217
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 612 VSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLL 508
VSPD+NEL +A +L+ AA +N F+K LS++L+
Sbjct: 17 VSPDKNELLSAKNFLEQAAASNLPEFLKALSEILV 51
>AY061359-1|AAL28907.1| 306|Drosophila melanogaster LD28549p
protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAI 114
P+LVEN+ V ++K+E TL A+ + ++ + ++ TE+ +IL+ +
Sbjct: 230 PVLVENLKPVDDFDIKQETTLFALSSLSRESELKLSTEKREEILSKL 276
>AE014296-2181|AAF49888.1| 255|Drosophila melanogaster CG10973-PA,
isoform A protein.
Length = 255
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAI 114
P+LVEN+ V ++K+E TL A+ + ++ + ++ TE+ +IL+ +
Sbjct: 179 PVLVENLKPVDDFDIKQETTLFALSSLSRESELKLSTEKREEILSKL 225
>AE014296-2180|ABC66152.1| 306|Drosophila melanogaster CG10973-PB,
isoform B protein.
Length = 306
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/47 (31%), Positives = 31/47 (65%)
Frame = -1
Query: 254 PILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAI 114
P+LVEN+ V ++K+E TL A+ + ++ + ++ TE+ +IL+ +
Sbjct: 230 PVLVENLKPVDDFDIKQETTLFALSSLSRESELKLSTEKREEILSKL 276
>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
protein.
Length = 2346
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 236 VVHVQSTELKKEATLEAIG-YICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLAAT 60
+ H Q+ L K+ + A + D +A+ L + N+IL ++ + + H +
Sbjct: 752 IKHEQTVHLLKDEMMAAHRKHAAADAEAQSLRQE-NRILRDTSSRLQIEKETYHREQQSQ 810
Query: 59 QALLNSLEFFRANFEKKK 6
LLNSLEF + N E+ +
Sbjct: 811 SLLLNSLEFIKTNLERSE 828
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 236 VVHVQSTELKKEATLEAIG-YICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLAAT 60
+ H Q+ L K+ + A + D +A+ L + N+IL ++ + + H +
Sbjct: 752 IKHEQTVHLLKDEMMAAHRKHAAADAEAQSLRQE-NRILRDTSSRLQIEKETYHREQQSQ 810
Query: 59 QALLNSLEFFRANFEKKK 6
LLNSLEF + N E+ +
Sbjct: 811 SLLLNSLEFIKTNLERSE 828
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,740,092
Number of Sequences: 53049
Number of extensions: 471775
Number of successful extensions: 1219
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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