Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1035
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53480.1 68418.m06646 importin beta-2, putative similar to im... 67 1e-11
At4g27640.1 68417.m03973 importin beta-2 subunit family protein ... 45 5e-05
At4g38420.1 68417.m05430 multi-copper oxidase type I family prot... 35 0.037
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 33 0.11
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 31 0.80
At2g27660.1 68415.m03352 DC1 domain-containing protein contains ... 30 1.1
At1g41830.1 68414.m04829 multi-copper oxidase type I family prot... 30 1.1
At3g27300.1 68416.m03412 glucose-6-phosphate 1-dehydrogenase / G... 30 1.4
At1g76160.1 68414.m08844 multi-copper oxidase type I family prot... 30 1.4
At5g66920.1 68418.m08435 multi-copper oxidase type I family prot... 29 3.2
At1g66290.1 68414.m07528 F-box family protein contains F-box dom... 28 4.3
At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G... 28 5.7
At1g21860.1 68414.m02736 multi-copper oxidase type I family prot... 28 5.7
At5g47690.1 68418.m05887 expressed protein 27 7.5
At4g22010.1 68417.m03185 multi-copper oxidase type I family prot... 27 7.5
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 27 7.5
At3g49480.1 68416.m05408 hypothetical protein several hypothetic... 27 7.5
At2g34280.1 68415.m04194 S locus F-box-related / SLF-related con... 27 9.9
At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PR... 27 9.9
At1g64550.1 68414.m07317 ABC transporter family protein similar ... 27 9.9
>At5g53480.1 68418.m06646 importin beta-2, putative similar to
importin-beta2 [Oryza sativa (japonica cultivar-group)]
GI:3983665; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 870
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -1
Query: 206 KEATLEAIGYICQDIDAEVLT-ERSNQILTAIIHGMRSTEPSNHVRLAATQALLNSLEFF 30
K+ATLE +GY+C+++ +V+ E N+ILTA++ GM + E + VRLAAT+AL +L F
Sbjct: 148 KQATLETLGYLCEEVSPDVVEQEHVNKILTAVVQGMNAAEGNTDVRLAATRALYMALGFA 207
Query: 29 RANF 18
+ANF
Sbjct: 208 QANF 211
Score = 50.4 bits (115), Expect = 9e-07
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -2
Query: 487 ARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQ 311
+R AGL LKN L +K+ K + QRWLAL + I+ +L + S+A+Q
Sbjct: 55 SRKLAGLVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQ 114
Query: 310 CVAYVAVAELPVGQWNDLI 254
+A VA ELP QW +LI
Sbjct: 115 VIAKVAGIELPQKQWPELI 133
>At4g27640.1 68417.m03973 importin beta-2 subunit family protein low
similarity to importin 4 GI:18700635 from [Homo sapiens]
Length = 1048
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -2
Query: 430 LKQQYQQRWLALAEDVRLYIKENILAAIGTENSRP--SSAAQCVAYVAVAELPVGQWNDL 257
L+++ W L+ ++ ++K++++ +I ENS P ++A V+ VA +P G+W DL
Sbjct: 60 LRKRITGHWAKLSPQLKQHVKQSLIESITVENSPPVRRASANVVSVVAKYAVPAGEWPDL 119
Query: 256 IQFL 245
+ FL
Sbjct: 120 LTFL 123
>At4g38420.1 68417.m05430 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
N++ NV N L FL ++ + + Y++ + CP TYA ++G F
Sbjct: 69 NLIINVHNDLDEPFLLSWNGVQLRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFY 128
Query: 342 VPIAA 356
P A
Sbjct: 129 FPSLA 133
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = -2
Query: 502 GNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPS 323
G S R AAGL LKN+L P++ Q+ Q+ YIK +L +G +
Sbjct: 63 GKSVEVRQAAGLLLKNNLRGAYPSMTQENQK-----------YIKSELLPCLGAADRNIR 111
Query: 322 SAAQCVAYVAVAELPVGQWNDLIQFL 245
+ + V V V W++L+ L
Sbjct: 112 TTVGTIISVIVNIEGVSGWHELLPAL 137
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
N++ NV N L FL +S + Y++ + CP TYA ++G +
Sbjct: 68 NLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYY 127
Query: 342 VP 347
P
Sbjct: 128 FP 129
>At2g27660.1 68415.m03352 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 718
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 571 PRPCCHHKFHNIHQNVVRCPSQGGN 497
P P HH H HQN + P+QG N
Sbjct: 190 PNPHTHHAGHPQHQNSLPVPNQGSN 214
>At1g41830.1 68414.m04829 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 542
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/65 (24%), Positives = 27/65 (41%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
N++ NV NSL FL ++ + Y + + CP + TY ++G +
Sbjct: 68 NLIINVHNSLDEPFLISWNGVQNRRNSYVDGMYGTTCPIPPRSNYTYILQVKDQIGSFYY 127
Query: 342 VPIAA 356
P A
Sbjct: 128 FPSLA 132
>At3g27300.1 68416.m03412 glucose-6-phosphate 1-dehydrogenase / G6PD
(ACG9) identical to glucose-6-phosphate 1-dehydrogenase
(acg9) [Arabidopsis thaliana] GI:5732195
Length = 516
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 550 KFHNIHQNVVRCPSQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALA 392
+F ++ ++ +C +QG N V R+ + LT K P L+ Q Q L L+
Sbjct: 373 QFKDVPGDIFKCQNQGRNEFVIRLQPSEAMYMKLTVKQPGLEMQTVQSELDLS 425
>At1g76160.1 68414.m08844 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
N++ NV NSL FL ++ + + + + CP TY ++G +
Sbjct: 67 NLIINVYNSLDEPFLLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQIGSFYY 126
Query: 342 VP 347
P
Sbjct: 127 FP 128
>At5g66920.1 68418.m08435 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 546
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/65 (21%), Positives = 28/65 (43%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
NI+ N+ N L FL ++ + +++ + +CP ++ TY ++G
Sbjct: 76 NIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFNY 135
Query: 342 VPIAA 356
P A
Sbjct: 136 FPSTA 140
>At1g66290.1 68414.m07528 F-box family protein contains F-box domain
Pfam:PF00646
Length = 453
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 398 SQPSLLILLFKCRIFRSEMIFQLQTSCHPSHLTVTTLRRTSDNI-LMNVVKFVVAAWSRY 574
S PSL +L+ F +E F + S P + T RR DN+ ++ V+ + +++ Y
Sbjct: 170 SLPSLKVLVLDWVEFYNEFAFDMLMSGCPVLESFTLCRRYLDNVRVLRVISQSLLSFN-Y 228
Query: 575 LTAASNSFR 601
++S SFR
Sbjct: 229 YGSSSKSFR 237
>At5g40760.1 68418.m04946 glucose-6-phosphate 1-dehydrogenase / G6PD
(ACG12) idential to glucose-6-phosphate 1-dehydrogenase
(acg12) [Arabidopsis thaliana] GI:5732197
Length = 515
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 550 KFHNIHQNVVRCPSQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALA 392
+F ++ ++ RC QG N V R+ + LT K P L Q L L+
Sbjct: 372 QFKDVPGDIFRCQKQGRNEFVIRLQPSEAMYMKLTVKQPGLDMNTVQSELDLS 424
>At1g21860.1 68414.m02736 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 538
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
N++ NV N L FL ++ + +++ + CP TYA ++G +
Sbjct: 68 NLIINVFNHLDEPFLLSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQVKDQIGSFYY 127
Query: 342 VP 347
P
Sbjct: 128 FP 129
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 547 FHNIHQNVVRCPSQGGNSQVARMAAGLQLKNHLTSKDPTLK 425
FH+I Q+ + + A GL + NHLT K+P L+
Sbjct: 1031 FHSIKQSEDVTDATKSKNSHAICELGLSIINHLTQKEPDLQ 1071
>At4g22010.1 68417.m03185 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +3
Query: 162 NILTNVANSLQSRFLFEFSRLDMNNIFYKNWIRSFHCPTGSSATATYATHCAAELGRLFS 341
NI+ +V N L+ FL ++ + +++ + CP TY ++G +
Sbjct: 65 NIIISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYY 124
Query: 342 VPIAA 356
P A
Sbjct: 125 FPSLA 129
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 159 INILTNVANSLQSRFLFEFSRLDMNNIFY 245
++ILT V + SRFLF S + MN + Y
Sbjct: 820 VDILTPVQVAKLSRFLFAVSHIAMNQLVY 848
>At3g49480.1 68416.m05408 hypothetical protein several hypothetical
proteins - Arabidopsis thaliana
Length = 309
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 392 CQ-SQPSLLILLFKCRIFRSE-MIFQLQTSCHP-SHLTVTTLRRTSDNI 529
CQ S PSL L C +++ E +L +SC HL VT RR DN+
Sbjct: 26 CQVSLPSLRELDLFCVVYKDEDSHVKLLSSCPVLKHLKVTRNRRVEDNV 74
>At2g34280.1 68415.m04194 S locus F-box-related / SLF-related
contains Pfam PF00646: F-box domain; contains weak hit
to TIGRFAM TIGR01640 : F-box protein interaction domain;
weakly similar to self-incompatibility (S-) locus F-box
(GI:29420811) [Prunus mume]
Length = 391
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 374 IKSNIFCQSQPSLLILLFKCRIFRSEMIFQLQTSCHPSHLTVT 502
+KS + C+S +CR F+ + + SC+P L V+
Sbjct: 18 VKSLLNCKSVSKQWRSTIRCRAFQERQLMHRRQSCNPDVLLVS 60
>At2g17980.1 68415.m02090 sec1 family protein similar to
SWISS-PROT:P22213 SLY1 protein [Saccharomyces
cerevisiae]; contains Pfam domain, PF00995: Sec1 family
Length = 627
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 526 VVRCPSQGGNSQVARMAAGLQLKNHLTSKD 437
V+RCPS GG +++ +L++HL SK+
Sbjct: 196 VIRCPS-GGPAEMVASLLDQKLRDHLLSKN 224
>At1g64550.1 68414.m07317 ABC transporter family protein similar to
ABC transporter protein GB:AAF31030 GI:6899653 from
[Leishmania major]
Length = 715
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 110 HGMRSTEPSNHVRLAATQALLNSLEFFR 27
H + EPSNH+ L A +AL+ L F+
Sbjct: 642 HLLLLDEPSNHLDLDAVEALIQGLVLFQ 669
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,009,969
Number of Sequences: 28952
Number of extensions: 223876
Number of successful extensions: 602
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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