Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1031
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 107 8e-24
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 107 8e-24
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 107 8e-24
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 107 8e-24
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 102 2e-22
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 96 3e-20
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 96 3e-20
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.48
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 7.9
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 7.9
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 7.9
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 107 bits (257), Expect = 8e-24
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -2
Query: 735 EKSTCCVSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDL 556
E + GE++GLT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDL
Sbjct: 25 ENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDL 84
Query: 555 GNIEAIEDSGVTKVSI 508
GN+EA D GV K+ +
Sbjct: 85 GNVEAGAD-GVAKIKL 99
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 350
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 101 DTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 107 bits (257), Expect = 8e-24
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -2
Query: 735 EKSTCCVSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDL 556
E + GE++GLT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDL
Sbjct: 25 ENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDL 84
Query: 555 GNIEAIEDSGVTKVSI 508
GN+EA D GV K+ +
Sbjct: 85 GNVEAGAD-GVAKIKL 99
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 350
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 101 DTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 107 bits (257), Expect = 8e-24
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -2
Query: 735 EKSTCCVSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDL 556
E + GE++GLT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDL
Sbjct: 25 ENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDL 84
Query: 555 GNIEAIEDSGVTKVSI 508
GN+EA D GV K+ +
Sbjct: 85 GNVEAGAD-GVAKIKL 99
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 350
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 101 DTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 107 bits (257), Expect = 8e-24
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = -2
Query: 735 EKSTCCVSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDL 556
E + GE++GLT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDL
Sbjct: 47 ENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDL 106
Query: 555 GNIEAIEDSGVTKVSI 508
GN+EA D GV K+ +
Sbjct: 107 GNVEAGAD-GVAKIKL 121
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 350
D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 123 DTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 102 bits (245), Expect = 2e-22
Identities = 43/66 (65%), Positives = 54/66 (81%)
Frame = -2
Query: 711 GEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIED 532
GE++GL+ G HGFH+H++GD+T+GCTSAG HFNP K +HGG S VRHVGDLGN+EA D
Sbjct: 53 GEIKGLSPGLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGAD 112
Query: 531 SGVTKV 514
GV K+
Sbjct: 113 -GVAKI 117
Score = 61.7 bits (143), Expect = 5e-10
Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 350
D +SL G N++IGR++VVH D DDLG G E S TGNAG R ACGVI LA
Sbjct: 121 DKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 717 VSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 538
++G V GL GKHGFH+HE GDT NGC SAG H+NP K HG P + RH+GDLGNIE+
Sbjct: 55 LNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES- 113
Query: 537 EDSGVTKVSI 508
SG T +S+
Sbjct: 114 PASGDTLISV 123
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 356
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 125 DSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 717 VSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 538
++G V GL GKHGFH+HE GDT NGC SAG H+NP K HG P + RH+GDLGNIE+
Sbjct: 55 LNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES- 113
Query: 537 EDSGVTKVSI 508
SG T +S+
Sbjct: 114 PASGDTLISV 123
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGLAK 347
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG+ +
Sbjct: 125 DSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIGIVE 177
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 717 VSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 538
++G V GL GKHGFH+HE GDT NGC SAG H+NP K HG P + RH+GDLGNIE+
Sbjct: 55 LNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES- 113
Query: 537 EDSGVTKVSI 508
SG T +S+
Sbjct: 114 PASGDTLISV 123
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -1
Query: 505 DSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 356
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 125 DSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 717 VSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFN 613
+ GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 911 IHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 717 VSGEVQGLTKGKHGFHVHEFGDTTNGCTSAGAHFN 613
+ GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 702 IHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 736
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 367 HKQYGHRHYQWSYLAHGHRVPSHQGQHGQ 453
H +G H HGH P+H G HG+
Sbjct: 580 HGSHGVHHGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 367 HKQYGHRHYQWSYLAHGHRVPSHQGQHGQ 453
H H H++ S+ HGH P+H G HG+
Sbjct: 434 HAPAHHGHHE-SH-GHGHHSPAHHGHHGE 460
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 621 HFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIK 505
+F P ++D S+V DL E D G+T++S+K
Sbjct: 398 NFAPHREDDRQSVSSVSTASDLSEKENGTDIGITRISVK 436
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 168 YYN*LCLHLFTIRWTNITVKDTGFFIYVG-KFKQKLVFKIS 287
YY LC H WTN+T T F++V F +K V K++
Sbjct: 243 YYEYLCTHY----WTNLTCY-TSIFVFVNVSFSEKCVSKLN 278
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 484 LITHVKPEDLDVLASELSKMGGHHNGR 510
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 494 LITHVKPEDLDVLASELSKMGGHHNGR 520
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 131 LITHVKPEDLDVLASELSKMGGHHNGR 157
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 204 LITHVKPEDLDVLASELSKMGGHHNGR 230
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 457 LVVHADPDDLGLGGHELSKTTGNAGGR 377
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,919,471
Number of Sequences: 27780
Number of extensions: 357297
Number of successful extensions: 1015
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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