Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1026
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical... 29 4.0
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 28 7.0
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 9.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 9.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 27 9.2
>AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical
protein W10G11.15 protein.
Length = 211
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -2
Query: 297 RPSGRWCEATIRGISLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 133
RPSG WC G + + AE S G + ++ R Q ++++ S
Sbjct: 49 RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 336 REEPQFRTFGSCTRPSGRWCEATIRGISLNASKAEASLAESGKDMLTVE-PRES 178
R EP +R F RPSG WC G + AEA+ G + ++ P+E+
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTGFHAAKADAEAACQAVGATLSGLQNPQEA 305
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 297 RPSGRWCEATIRGISLNASKAEASLAESGKDMLTVEPRE 181
RPSG WC GI +AE + A G + ++ R+
Sbjct: 93 RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 556 VTTGITGL----WQPSVHSDLLFDPSMSALPIIAKQNSPSV 446
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 330 EPQFRTFGSCTRPSGRWCEATIRGISLNASKAEASLAESGKDMLTVE 190
EP ++ F RPSG WC G + + AE S G + ++
Sbjct: 41 EPGWKFFN---RPSGGWCMRVFAGFNAKKADAEKSCQAVGSTLSGIQ 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,268
Number of Sequences: 27780
Number of extensions: 312092
Number of successful extensions: 879
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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