Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1023
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    35   6e-04
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    31   0.009
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.82 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 344 CYMPKRLMLPRGTEGGFPFQLFVFV 270
           C  P+ ++LP+GTE G+P  LFV +
Sbjct: 579 CGWPQHMLLPKGTEAGYPCHLFVMI 603


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 CYMPKRLMLPRGTEGGFPFQLFVFVYPFDN 255
           C  P+ +++P+GT  G   QLFV +  +D+
Sbjct: 580 CGWPQHMLIPKGTPEGMKSQLFVMISNYDD 609


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 678 WINEIPTVPI 707
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +1

Query: 271 TKTKSWNGNPPS-VPLGSMSLLGM*QNSSDISKGTFPSADLP 393
           T   SW G PP   P+G +SL         + K    + D P
Sbjct: 32  TTASSWPGRPPKRAPVG-LSLAASHLQQQQLKKQRLDNGDYP 72


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 117 GERFPYKFNIPSYDTQSN 64
           G+  PY FN+  +DT  N
Sbjct: 445 GDDVPYIFNMGLFDTSRN 462


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 220 NKRFERSQVLAL 255
           N+RF+R+Q LAL
Sbjct: 137 NRRFQRTQYLAL 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,225
Number of Sequences: 336
Number of extensions: 3891
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)