Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1023
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53001| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_32812| Best HMM Match : CfAFP (HMM E-Value=9.5) 47 2e-05
SB_11908| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35) 42 5e-04
SB_40229| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.94
SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.94
SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 31 0.94
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 31 1.2
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 2.9
SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33) 29 3.8
SB_30055| Best HMM Match : Histone (HMM E-Value=0.97) 29 3.8
SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15) 29 5.0
SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31) 29 5.0
SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33) 28 6.6
SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32) 28 6.6
SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12) 28 6.6
SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0) 28 6.6
SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016) 28 6.6
SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33) 28 6.6
SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33) 28 6.6
SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33) 28 6.6
SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 28 8.8
SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33) 28 8.8
SB_26684| Best HMM Match : DUF1279 (HMM E-Value=0.52) 28 8.8
SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31) 28 8.8
SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1) 28 8.8
>SB_53001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 645 MPRHLISDAHEWINEIPTVPI 707
MPRHLISDAHEWINEIPTVPI
Sbjct: 1 MPRHLISDAHEWINEIPTVPI 21
>SB_32812| Best HMM Match : CfAFP (HMM E-Value=9.5)
Length = 167
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 562 SALNVNVKKFKQARVNGGSNYDSL 633
+ALNV VKKF QARVNGGSNYDSL
Sbjct: 28 AALNVKVKKFNQARVNGGSNYDSL 51
>SB_11908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +1
Query: 565 ALNVNVKKFKQARVNGGSNYDSL 633
ALNV VKKF QARVNG SNYDSL
Sbjct: 2 ALNVKVKKFNQARVNGWSNYDSL 24
>SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35)
Length = 521
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 574 HSEHWAEITLRQHPRGPSQCFV 509
++EHWAEITLRQH PSQCFV
Sbjct: 48 NNEHWAEITLRQHRFRPSQCFV 69
>SB_40229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 559 PSALNVNVKKFKQARVNGGSNYDS 630
PSALNV VKKF QARVNGG +S
Sbjct: 31 PSALNVKVKKFNQARVNGGDPLES 54
>SB_43292| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 645
Score = 31.1 bits (67), Expect = 0.94
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 184 AIQREAKRLIVKNKRFE-RSQVLALLSNG*TKTKSWNG-NPPSVPL--GSMSL--LGM*Q 345
A+ R L++K+K+F +V +S TK G P ++ L GS+ + LG
Sbjct: 141 AVTRGKMMLVLKDKQFHVERRVCVDMSRVRTKGAGLKGAEPHAIQLMKGSLRVESLGKLT 200
Query: 346 NSSDISKGTFPSADLPSRKVVSVSFRARSARFCTTAVQR 462
SSD+ G FP SR SV R R+ T ++
Sbjct: 201 ESSDLKAGVFPIGFKVSRLYWSVLEPTRRCRYYCTITEK 239
>SB_48580| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 847
Score = 31.1 bits (67), Expect = 0.94
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 184 AIQREAKRLIVKNKRFE-RSQVLALLSNG*TKTKSWNG-NPPSVPL--GSMSL--LGM*Q 345
A+ R L++K+K+F +V +S TK G P ++ L GS+ + LG
Sbjct: 141 AVTRGKMMLVLKDKQFHVERRVCVDMSRVRTKGAGLKGAEPHAIQLMKGSLRVESLGKLT 200
Query: 346 NSSDISKGTFPSADLPSRKVVSVSFRARSARFCTTAVQR 462
SSD+ G FP SR SV R R+ T ++
Sbjct: 201 ESSDLKAGVFPIGFKVSRLYWSVLEPTRRCRYYCTITEK 239
>SB_5164| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 435
Score = 31.1 bits (67), Expect = 0.94
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +1
Query: 184 AIQREAKRLIVKNKRFE-RSQVLALLSNG*TKTKSWNG-NPPSVPL--GSMSL--LGM*Q 345
A+ R L++K+K+F +V +S TK G P ++ L GS+ + LG
Sbjct: 141 AVTRGKMMLVLKDKQFHVERRVCVDMSRVRTKGAGLKGAEPHAIQLMKGSLRVESLGKLT 200
Query: 346 NSSDISKGTFPSADLPSRKVVSVSFRARSARFCTTAVQR 462
SSD+ G FP SR SV R R+ T ++
Sbjct: 201 ESSDLKAGVFPIGFKVSRLYWSVLEPTRRCRYYCTITEK 239
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 264 IRQQG-KDLAPFESFVLDNKPLGFPLDRPV 178
IR+QG + PF+ FV K +GFP+ +PV
Sbjct: 240 IRKQGFSERLPFDDFVKRYKVIGFPMHKPV 269
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 183 GDPEGSQEAYCQEQKIRKEPSPCLVVEWIDENKELEWESTFSTSRQHE 326
GD + E +E RK P+ VVE IDE++ +E E T T E
Sbjct: 1855 GDDDDDLEEEAEEVAERKAPAVVDVVEVIDEDECVEEEETQPTVEDEE 1902
>SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 134
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 152 LGTLNNASTTGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+ + + +GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 1 VANIQTLTMSGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 44
>SB_30055| Best HMM Match : Histone (HMM E-Value=0.97)
Length = 129
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 155 GTLNNASTTGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
G L + +GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 67 GLLVVMTMSGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 109
>SB_35214| Best HMM Match : FYRN (HMM E-Value=6.3e-15)
Length = 762
Score = 28.7 bits (61), Expect = 5.0
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +1
Query: 208 LIVKNKRFE-RSQVLALLSNG*TKTKSWNG-NPPSVPL--GSMSL--LGM*QNSSDISKG 369
L++K+K+F +V +S TK G P ++ L GS+ + LG SSD+ G
Sbjct: 1 LVLKDKQFHVERRVCVDMSRVRTKGAGLKGAEPHAIQLMKGSLRVESLGKLTESSDLKAG 60
Query: 370 TFPSADLPSRKVVSVSFRARSARFCTTAVQR 462
FP SR SV R R+ T ++
Sbjct: 61 VFPIGFKVSRLYWSVLEPTRRCRYYCTITEK 91
>SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31)
Length = 125
Score = 28.7 bits (61), Expect = 5.0
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDR--RK----QRAGMG--IH----LQYL*AA 322
+GR +GK +G S+T+ S+ P R+ R RK +R G G +H L+YL +A
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRKGNYAERVGAGAPVHLAAVLEYL-SA 60
Query: 323 *VF*ACNRTLPTYQKVLFLPR-IFLAVRS 406
+ +K +PR + LAVR+
Sbjct: 61 EILELAGNAARDNKKTRIIPRHLQLAVRN 89
>SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_13174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1108
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 138 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN 49
D+F+++ GE + IP YDT ++ P +
Sbjct: 195 DVFVFYPGEGYRNMHVIPGYDTAADEYPSH 224
>SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 372 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 406
>SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12)
Length = 74
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPIGRIHRHLRK 36
>SB_56854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -3
Query: 188 IAPLLMHYSRFLTCISRIFSFTTRVNGSLTNSIFLRMTHS 69
I PL+ L C+S + T ++GSL++ + ++TH+
Sbjct: 45 ILPLVPRPKELLECVSNMRLLTWLLHGSLSHMVHSKITHA 84
>SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 126
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0)
Length = 863
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 739 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 773
>SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016)
Length = 67
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDRRKQR 283
+GR +GK +G S+T+ S+ P R+ R ++
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHRHLRK 36
>SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDR 271
+GR +GK +G S+T+ S+ P R+ R
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHR 32
>SB_12593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 138 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN 49
D+F+++ GE + IP YDT ++ P +
Sbjct: 259 DVFVFYPGEGYRNVHVIPGYDTAADEYPSH 288
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 264 WIDENKELEWESTFSTSRQHESFRHVTELFRHIKRYFSFRGSS 392
W D KEL F S H+ F ++T+ + + +Y F+ S+
Sbjct: 402 WGDRLKELIKYKGFQVSTIHDRFGYITDRLKELIKYKGFQVSA 444
>SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33)
Length = 126
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDR 271
+GR +GK +G S+T+ S+ P R+ R
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHR 32
>SB_26684| Best HMM Match : DUF1279 (HMM E-Value=0.52)
Length = 464
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 186 DPEGSQEAYCQEQKIRKEPSPCLVVEWIDENKELE 290
D + E+ CQE + R E L+ E EN+ELE
Sbjct: 135 DDPNTSESSCQEARERNEERLSLIDELERENRELE 169
>SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31)
Length = 126
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 179 TGRSRGKPRGLLSRTKDSKGAKSLPCCRMDR 271
+GR +GK +G S+T+ S+ P R+ R
Sbjct: 2 SGRGKGKAKGTKSKTRSSRAGLQFPVGRIHR 32
>SB_2018| Best HMM Match : AIRC (HMM E-Value=5.1)
Length = 298
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 138 DIFIYHEGERFPYKFNIPSYDTQSNVVPKN 49
D+F+++ GE + IP YDT ++ P +
Sbjct: 253 DVFVFYPGEGYRNVHVIPGYDTAADEYPSH 282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,228,411
Number of Sequences: 59808
Number of extensions: 498273
Number of successful extensions: 1464
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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