Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1022
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p pro...    44   3e-04
AF161774-1|AAD45778.1|  584|Drosophila melanogaster C2H2 zinc-fi...    29   5.0  
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h...    29   8.7  
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro...    29   8.7  
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro...    29   8.7  
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ...    29   8.7  

>BT012669-1|AAT08475.1|   46|Drosophila melanogaster LD48059p
           protein.
          Length = 46

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 184 EHKCWDPKDGELCLVRSKSGETLM 255
           EH C DPKDGEL L+R KSGETLM
Sbjct: 9   EHICCDPKDGELYLIRLKSGETLM 32


>AF161774-1|AAD45778.1|  584|Drosophila melanogaster C2H2
           zinc-finger protein protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +3

Query: 126 RDFRTPEASRFQSVNEGAL*AQMLGPERW*TMPGQVEVRGNPDEDRSDSDVQIDR 290
           ++F +P  SRF  ++  AL + MLGP     + G V+  G  DE+  + + +I R
Sbjct: 173 KNFASPVDSRFDMIDNDALTSGMLGPSIE-DLSGTVD-DGTEDEEEEEEEEEIVR 225


>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
           chromodomain-helicase-DNA-bindingprotein protein.
          Length = 1883

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 217 VHHLSGPSICAQSAPSFTDWKRD 149
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
           protein.
          Length = 1645

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 217 VHHLSGPSICAQSAPSFTDWKRD 149
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
           protein.
          Length = 1101

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 217 VHHLSGPSICAQSAPSFTDWKRD 149
           +HHL GP +C     + T W+R+
Sbjct: 41  IHHLYGPFLCVVPLSTMTAWQRE 63


>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
           protein.
          Length = 1883

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 217 VHHLSGPSICAQSAPSFTDWKRD 149
           +HHL GP +C     + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,079,216
Number of Sequences: 53049
Number of extensions: 755392
Number of successful extensions: 1752
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1752
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)