Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1022
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   3.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.9  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 506 SPASSFE*AGVLTHLKFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGN 351
           S A+S E   + TH +  ++LR  R     S  L DE   K +  ++  EGN
Sbjct: 220 STAASDEDISLTTHQQKRHKLRVTRCYSSDSAVLSDEDQTKGWDGSNMVEGN 271


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 329 DGSISLSPLYPVPTIDLHVRIATVLIRVSPDFD 231
           DGS   S L  V  ID+  +  T+L  VS + D
Sbjct: 100 DGSDDYSTLIRVRVIDVRPQNETILTTVSSEAD 132


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 329 DGSISLSPLYPVPTIDLHVRIATVLIRVSPDFD 231
           DGS   S L  V  ID+  +  T+L  VS + D
Sbjct: 148 DGSDDYSTLIRVRVIDVRPQNETILTTVSSEAD 180


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 329 DGSISLSPLYPVPTIDLHVRIATVLIRVSPDFD 231
           DGS   S L  V  ID+  +  T+L  VS + D
Sbjct: 148 DGSDDYSTLIRVRVIDVRPQNETILTTVSSEAD 180


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 329 DGSISLSPLYPVPTIDLHVRIATVLIRVSPDFD 231
           DGS   S L  V  ID+  +  T+L  VS + D
Sbjct: 148 DGSDDYSTLIRVRVIDVRPQNETILTTVSSEAD 180


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 650 GSRNPLRSVHDS 685
           GSRNPL   HDS
Sbjct: 506 GSRNPLLQEHDS 517


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 314 LSPLYPVPTID 282
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 314 LSPLYPVPTID 282
           LSP+YP P +D
Sbjct: 71  LSPIYPSPMVD 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,061
Number of Sequences: 438
Number of extensions: 4961
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)