Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1013
(326 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 1.7
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 1.7
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 25 2.9
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 25 2.9
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 2.9
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 25 2.9
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 3.8
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 25 3.8
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 25 3.8
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 24 5.1
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 24 5.1
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 24 5.1
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 24 5.1
SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces... 24 6.7
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 24 6.7
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 24 6.7
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ... 23 8.8
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 23 8.8
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 23 8.8
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 1.7
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -2
Query: 316 FPTLSYRLEALPLGDLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPS 137
FP+ + E LP D R + H+ SPE ++++ R P ++ S PS
Sbjct: 137 FPSTTSITENLPTIDPTRS-TRSSSHIQ-SLSPESKQTSDGHRPPSPTSITTTSTSIDPS 194
Query: 136 IGFHGTRTLRQKRKLFP 86
+ F TL R P
Sbjct: 195 VAFSSKSTLATTRTNAP 211
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 25.8 bits (54), Expect = 1.7
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = -2
Query: 175 MRCSSRSEPYLPSI-GFHGTRTLRQKRKLFPDLSAASSGHFGLPRRT 38
MR + E Y+ + G H T Q LF D + H L RRT
Sbjct: 1 MRPAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRT 47
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 25.0 bits (52), Expect = 2.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 34 RVFDGVTQSGLKTPPRGPGRV 96
RVF G +SGLK +GP V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.0 bits (52), Expect = 2.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 34 RVFDGVTQSGLKTPPRGPGRV 96
RVF G +SGLK +GP V
Sbjct: 399 RVFSGTVRSGLKVRIQGPNYV 419
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.0 bits (52), Expect = 2.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 279 LETCCGYGSNRRDISTYIPHLNFQGPQ 199
LE+C G D++ HL F GPQ
Sbjct: 137 LESCIGGAKALADLTGSKAHLRFTGPQ 163
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.0 bits (52), Expect = 2.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 258 GSNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVPNHISL 139
G+++ +IST +P P++VSGH A R+P+ S+
Sbjct: 374 GTSQSNISTPLPEPTPGQPRKVSGHNPP-SARRLPSASSV 412
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 24.6 bits (51), Expect = 3.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 204 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQA 61
P VSGH LR+ IS SM +ERS R ++ + +
Sbjct: 617 PLPVSGHTNNAHPLRLSTEISASQLSMIIERSVELSKHKRLNKELIDS 664
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 24.6 bits (51), Expect = 3.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 123 PWNPIEGRYGSEREEHRI 176
P+ P+EG Y + ++ HRI
Sbjct: 3 PYEPVEGLYVNAKQYHRI 20
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -2
Query: 139 SIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRT 38
++ GTR L+ K PD+ ++ G + L T
Sbjct: 8 NVNIQGTRVLKNKLGKIPDIDISTDGKYLLSAST 41
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 94 LFPDLSAASSGHFGLPRRT 38
LFP +S + G F +PRRT
Sbjct: 386 LFPSVSVENFGCFQVPRRT 404
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 24.2 bits (50), Expect = 5.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 180 RKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQATLGYPVEHSFLK 25
+K + +P HI LL + E + + +++ + SRRR L EH LK
Sbjct: 1037 QKISEMNIPGHIHLLRELEEEKSNTQRKIAHFESRRRYLTNL---YEHIVLK 1085
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 24.2 bits (50), Expect = 5.1
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = -2
Query: 199 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDE 20
ESI P+ E ++ F GTR L+ + F L +G + RT +
Sbjct: 317 ESIELRPEEAVIDVDELDKNAVLFGGTRVLQVTQSPFCKLKTPDNGVPAIVLRTGFETSQ 376
Query: 19 GTLIET 2
G+L+ T
Sbjct: 377 GSLVRT 382
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 24.2 bits (50), Expect = 5.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 322 FPFPTLSYRLEALPLGDLLRIWVEPARHLHVHPSP 218
+P PT+ Y P+ P++H V PSP
Sbjct: 590 YPTPTMPYIPVGYPVPGYTPYMRNPSQHTSVAPSP 624
>SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 208
Score = 23.8 bits (49), Expect = 6.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 75 RRLQATLGYPVEHSFLKTRERLLKR 1
RR+ +T+G PV+H E L+R
Sbjct: 87 RRVASTIGIPVDHRRRNRSEESLQR 111
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 23.8 bits (49), Expect = 6.7
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1
Query: 118 EFHGIL*KGDMVRNAKST 171
E+HG+ +G +VRNA ++
Sbjct: 69 EYHGVQARGQLVRNADNS 86
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 23.8 bits (49), Expect = 6.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 84 SGKSFLFCLSVRVPWNPIEGRYGSERE 164
+G LFCLS+ WN +Y R+
Sbjct: 478 AGSLQLFCLSIIKRWNQTGQKYSDLRD 504
>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 201
Score = 23.4 bits (48), Expect = 8.8
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +3
Query: 168 HRICGGVRILSADLENSGEGCTWRC 242
H I G + + EGC WRC
Sbjct: 44 HEIPGSTGVFATMPRPPLEGCRWRC 68
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 23.4 bits (48), Expect = 8.8
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 300 IDWRLFPLETCCGYGSNRRDISTYIPHLNFQGPQRVSGHR 181
+ W L L C G + T I H +FQG R+ +
Sbjct: 267 LSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFVRIESQK 306
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 23.4 bits (48), Expect = 8.8
Identities = 23/78 (29%), Positives = 30/78 (38%)
Frame = -3
Query: 303 PIDWRLFPLETCCGYGSNRRDISTYIPHLNFQGPQRVSGHRRKCGALRVPNHISLL*DSM 124
P W L+ C G +N HL+ P R R+K L L DS
Sbjct: 3 PCKWLTMFLKGCWGKIANMN-------HLDSCFPLRYIIGRKKASKLLCTMDSGLKSDSH 55
Query: 123 ELERSGRKENSSRTSRRR 70
E+ERS + N S +R
Sbjct: 56 EVERSNFQLNKPEKSLKR 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,441,719
Number of Sequences: 5004
Number of extensions: 28263
Number of successful extensions: 99
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 89857768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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