Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1013
(326 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 0.97
At5g42370.1 68418.m05159 expressed protein 29 0.97
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 1.3
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 28 1.7
At5g22390.1 68418.m02612 expressed protein 27 2.2
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 2.2
At2g05210.1 68415.m00549 expressed protein 27 3.0
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 27 3.0
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 27 3.0
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 27 3.9
At3g60520.1 68416.m06769 expressed protein 27 3.9
At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 27 3.9
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 26 5.2
At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putat... 26 5.2
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 26 5.2
At5g63560.1 68418.m07977 transferase family protein similar to h... 26 6.8
At5g25580.1 68418.m03044 expressed protein 26 6.8
At1g78310.1 68414.m09126 VQ motif-containing protein contains PF... 26 6.8
At1g67560.1 68414.m07697 lipoxygenase family protein similar to ... 26 6.8
At4g31805.1 68417.m04519 WRKY family transcription factor identi... 25 9.0
At3g55810.1 68416.m06201 pyruvate kinase, putative similar to py... 25 9.0
At3g03520.1 68416.m00351 phosphoesterase family protein low simi... 25 9.0
At2g41600.2 68415.m05140 expressed protein 25 9.0
At2g41600.1 68415.m05141 expressed protein 25 9.0
At1g32660.1 68414.m04028 F-box family protein contains Pfam prof... 25 9.0
At1g31490.1 68414.m03855 transferase family protein contains sim... 25 9.0
At1g03475.1 68414.m00329 coproporphyrinogen III oxidase, putativ... 25 9.0
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 204 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 70
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 143 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 33
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 199 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 101
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 6 SISVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 137
S+ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 78 ERSGKSFLFCLSVRVPWNPIEG 143
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 241 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 152
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 199 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 44
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 126 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 7
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 126 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 7
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 205 SAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHF 56
S S PP R SS + S F T+++ Q++ FP + AA HF
Sbjct: 10 SMGSSLAPPSNRLSSFVS--ISSSSFGRTQSIAQRKARFPKIYAAKQLHF 57
>At3g60520.1 68416.m06769 expressed protein
Length = 129
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1
Query: 287 SSPWRPAADMGRTGATSPR 231
SS PAAD G+TG SPR
Sbjct: 97 SSSIPPAADKGKTGVPSPR 115
>At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein similar to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 676
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 160 RSEPYLPSIGFHGTRTLRQKRK 95
R+ PY+P + F G RTL+ +R+
Sbjct: 288 RTFPYVPDMKFSGNRTLKLERQ 309
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 274 DLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSE 152
D++ I +P ++ P F+R ES + PP+ ++ E
Sbjct: 293 DVIEIQTKPHDYVRGESGPNFARMTESGQQPPKKPSNNEEE 333
>At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putative
/ glycerol 3-phosphate permease, putative similar to
glycerol-3-phosphate transporter (glycerol 3-phosphate
permease) [Homo sapiens] GI:7543982; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 493
Score = 26.2 bits (55), Expect = 5.2
Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -2
Query: 316 FPTLSYRLEALPLGDLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPS 137
FP L+ + +L + + + H S + +S+ PP + SS + P
Sbjct: 15 FPNLNTPHKTFTFHQILVLIITFTAYASFHASRKPPSIVKSVLGPPSLNSSSIDNGWAPF 74
Query: 136 IGFHGTRTLRQKRKLFPD---LSAASSGHFG 53
G GT+ L + F L +GH G
Sbjct: 75 NGTQGTKRLGELDLAFLSSYALGMYFAGHLG 105
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 258 GSNRRDISTYIPHLNFQGPQRVSGHRR 178
GS+RRD+ST PH +GH +
Sbjct: 31 GSHRRDLSTLRPHFLSGSSSGANGHTK 57
>At5g63560.1 68418.m07977 transferase family protein similar to
hypersensitivity-related gene product HSR201 - Nicotiana
tabacum, EMBL:X95343; contains Pfam transferase family
domain PF00248
Length = 426
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -2
Query: 274 DLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRK 95
+ L W E AR L + P R+ RTPP++ L I GT L K
Sbjct: 172 EFLNSWAETARGLPLSVPPFLDRTLLRPRTPPKIEFPHNEFEDLEDIS--GTGKLYSDEK 229
Query: 94 L 92
L
Sbjct: 230 L 230
>At5g25580.1 68418.m03044 expressed protein
Length = 405
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 135 IEGRYGSEREEHRICGGVRILSADLEN 215
+ G ++EE R+C + ILS+D +N
Sbjct: 11 VTGEPEQKKEEERLCEDLTILSSDSDN 37
>At1g78310.1 68414.m09126 VQ motif-containing protein contains
PF05678: VQ motif
Length = 311
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 265 RIWVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR 158
RI P + +H HP P+ S IR PP + +R
Sbjct: 105 RISAPPQQPIH-HPKPQQSSRLHRIRPPPLVHVINR 139
>At1g67560.1 68414.m07697 lipoxygenase family protein similar to
13-lipoxygenase GB:CAA65269 [Solanum tuberosum],
gi:1654140 [Lycopersicon esculentum]
Length = 917
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 181 PQMRCSSRSEPYLPSIGFHGTRTLRQK 101
PQ R RS+P LPS G + LR+K
Sbjct: 209 PQARIIFRSQPCLPSETPDGIKELREK 235
>At4g31805.1 68417.m04519 WRKY family transcription factor identical
to WRKY DNA-binding protein 18 (WRKY18) GI:13506730 from
[Arabidopsis thaliana]
Length = 344
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 259 WVEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEP 149
W + A L PE SRS P CS RS P
Sbjct: 293 WWKDAARLLAQRVPESSRSGLEWCNPDSSTCSERSVP 329
>At3g55810.1 68416.m06201 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Nicotiana tabacum]
SWISS-PROT:Q42954
Length = 492
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 126 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLLK 4
ME+ GR N + S+ ++ TLG PV S ++ E+LLK
Sbjct: 1 MEMLLGGRATNGALRSKTKIVCTLG-PVSRS-VEMIEKLLK 39
>At3g03520.1 68416.m00351 phosphoesterase family protein low
similarity to SP|P95246 Phospholipase C 2 precursor (EC
3.1.4.3) {Mycobacterium tuberculosis}; contains Pfam
profile PF04185: Phosphoesterase family
Length = 523
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 322 FPFPTLSYRLEALPLGDLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQMR 170
F F L R+ AL L+ W+EP LH PE + E P ++
Sbjct: 329 FKFDRLGVRVPAL----LISPWIEPGTVLHEPNGPEPTSQFEHSSIPATLK 375
>At2g41600.2 68415.m05140 expressed protein
Length = 164
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 313 PTLSYRLEALPLGDLLRIWVEPARHLHVHP 224
P L L+A+ GDLL+I RH HP
Sbjct: 6 PLLKRGLKAIENGDLLKILQSEIRHEISHP 35
>At2g41600.1 68415.m05141 expressed protein
Length = 151
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 313 PTLSYRLEALPLGDLLRIWVEPARHLHVHP 224
P L L+A+ GDLL+I RH HP
Sbjct: 6 PLLKRGLKAIENGDLLKILQSEIRHEISHP 35
>At1g32660.1 68414.m04028 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 446
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 220 VRDVRGDVAPVRPI 261
+R +RGD+AP RPI
Sbjct: 237 MRQIRGDLAPYRPI 250
>At1g31490.1 68414.m03855 transferase family protein contains
similarity to anthranilate N-hydroxycinnamoyl
benzoyltransferase GI:3288180, GI:2239091 from (Dianthus
caryophyllus); contains Pfam profile PF02458 transferase
family
Length = 444
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 292 EALPLGDLLRIWVEPARHLHVHPSPEFSRSAESIRTPPQ 176
+A G L +W E +R+ V P+ R+ R+PP+
Sbjct: 159 DASSFGKFLTLWSEISRNKPVSCVPDHRRNLLRARSPPR 197
>At1g03475.1 68414.m00329 coproporphyrinogen III oxidase, putative /
coproporphyrinogenase, putative / coprogen oxidase,
putative similar to coproporphyrinogen III oxidase,
chloroplast [precursor] from Glycine max [SP|P35055],
Nicotiana tabacum [SP|Q42946], Hordeum vulgare
[SP|Q42840], ESTs gb|AA586260 and dbj|D48620; contains
Pfam domain coproporphyrinogen III oxidase, aerobic
[PF01218]
Length = 362
Score = 25.4 bits (53), Expect = 9.0
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -2
Query: 247 ARHLHVHPSPEFSRSAESIRTPPQ--MRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSA 74
+ LH P+P R + IR P +RCS E +P T LR + P S+
Sbjct: 19 SHRLHYSPNPSTLRFSRPIRNKPNLALRCSVSIEKEVPETERPFT-FLRDSDDVTPSSSS 77
Query: 73 AS 68
+S
Sbjct: 78 SS 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,864,444
Number of Sequences: 28952
Number of extensions: 160517
Number of successful extensions: 552
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 370553816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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