Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1010
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    39   3e-05
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    33   0.002
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 35/58 (60%)
 Frame = +3

Query: 384 TSLRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYFDGVKITMLKSIN*QHSSRTLNS 557
           T++RDP FY+ ++ I +   E+K  L  YT+++L + G+ ++ ++  +   S  T N+
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNT 449


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 33.1 bits (72), Expect = 0.002
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 390 LRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLYFDGVKITMLK 518
           LRDP F++ +  I +   EFK  L  YT  +L + GV +T ++
Sbjct: 394 LRDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIE 436


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 620 KVRQPRLNHSPFNVNIE 670
           K   P LNH P N+ I+
Sbjct: 255 KQELPDLNHKPLNLTIK 271


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 620 KVRQPRLNHSPFNVNIE 670
           K   P LNH P N+ I+
Sbjct: 147 KQELPDLNHKPLNLTIK 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,252
Number of Sequences: 336
Number of extensions: 3209
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)