Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1007
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   3.9  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   3.9  
AE014296-776|AAN11589.1|  575|Drosophila melanogaster CG32260-PA...    28   9.1  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 342 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI 253
           R+ FS  +  WNY  CW   C   P+  R N+
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNL 358


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 342 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI 253
           R+ FS  +  WNY  CW   C   P+  R N+
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNL 358


>AE014296-776|AAN11589.1|  575|Drosophila melanogaster CG32260-PA
           protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 279 PPIVPR*NIKVYSFRLRGLVRVPYRYFSSLPPVPGVGNLRACCLPWM 139
           P ++P+    VY F L GLV   + Y  + P  PGV    A  +PW+
Sbjct: 524 PLMMPQLEGNVYRFYLLGLVS--FGYECARPNFPGVYTRVASYVPWI 568


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,651,589
Number of Sequences: 53049
Number of extensions: 522873
Number of successful extensions: 1274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)