Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1007
(530 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.9
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 1.9
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -3
Query: 492 TEEHRDRILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 313
T + R R R E ++ +S N S ++ + NY NN+ Y++
Sbjct: 295 TSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYN 354
Query: 312 WNY 304
NY
Sbjct: 355 INY 357
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 456 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 304
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 456 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 304
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 456 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 304
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 456 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 304
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 2.6
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 456 RRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 304
R+ + R D S P++ S ++ NY +N NN+ ++ NY
Sbjct: 60 RKTSKERSRDRTERERSKEPKI--ISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 4.5
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -3
Query: 489 EEHRDRILILNRRFLERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSW 310
E RDR R E ++ +S N ++ ++ + NY N NN+ Y++
Sbjct: 65 ERSRDRTE--RERSREPKIISSLS-NKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121
Query: 309 NY 304
NY
Sbjct: 122 NY 123
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 149 RQQARKLPTPGTGGSDE 199
R+Q RK TPG SDE
Sbjct: 1768 RRQQRKQQTPGDVESDE 1784
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 149 RQQARKLPTPGTGGSDE 199
R+Q RK TPG SDE
Sbjct: 1764 RRQQRKQQTPGDVESDE 1780
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.0 bits (42), Expect = 7.9
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = -3
Query: 447 LERRLTDDISANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNYRG 298
L + T + +VS P S Y F+ + +++ SW Y G
Sbjct: 134 LMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNG 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,988
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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