Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1006
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -2

Query: 471 IASLTIR*FFNYQISYSPNMLTLNMLLNYVNSIFCIIVFTRLQYISYFNII 319
           +A+LT+   F     Y     +L ++   V   + I +   LQY  Y NI+
Sbjct: 155 VATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNIL 205


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 517 RKYF*TEIILVMSCRYIANILSTVSTC 597
           RK++ T I  +MS   + +ILS V+TC
Sbjct: 310 RKFYLT-ICTIMSAAAVEHILSIVNTC 335


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -2

Query: 471 IASLTIR*FFNYQISYSPNMLTLNMLLNYVNSIFCIIVFTRLQYISYFNII 319
           +A+LT+   F     Y     +L ++   V   + I +   LQY  Y NI+
Sbjct: 155 VATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNIL 205


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 556 CRYIANILSTVSTCEINF 609
           C    + + TVS CE+NF
Sbjct: 316 CDVCYSTIGTVSWCELNF 333


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 373 FLHNCIHATAIYFL 332
           FL+NC H+T +  +
Sbjct: 144 FLYNCFHSTLLLMI 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,006
Number of Sequences: 336
Number of extensions: 3212
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)