Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1005
(729 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 27 0.21
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.4
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 24 1.4
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 24 1.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.4
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 4.4
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 22 5.8
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 7.7
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 7.7
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 21 7.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 26.6 bits (56), Expect = 0.21
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Frame = +1
Query: 199 SGRSQ--GKP*WRTVAILTCNRSSELGIGAKD*SNHLVAGS------VRSFPQDSWRRYK 354
SG +Q G P A+LTC + K+ SNH+V S +RS + RR +
Sbjct: 531 SGNNQPPGGPSSHVSAVLTCKVCDQAFSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQ 590
Query: 355 I---LKQSHPVKRMI 390
K+S PV++++
Sbjct: 591 TREKRKKSLPVRKLL 605
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = -2
Query: 710 IGKTLQRHPFQGWLLRQVSRCTLLSGFR 627
+G RHP++ W +S T G +
Sbjct: 153 LGSVYSRHPYESWPFNTMSGATHHGGIK 180
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 168 WDPKDGELCLVRSKSGETLMEDRSDSDVQSIVGTGYRGERLIEPSSSWFRPKF 326
++P+ E+ L ++S E ME + T Y +L+E + R K+
Sbjct: 57 FEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLVELEREFHRSKY 109
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 168 WDPKDGELCLVRSKSGETLMEDRSDSDVQSIVGTGYRGERLIEPSSSWFRPKF 326
++P+ E+ L ++S E ME + T Y +L+E + R K+
Sbjct: 77 FEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLVELEREFHRSKY 129
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 609 GRWPWKSESAKECATTHLPKQPAL 680
GR WK + AT L K P+L
Sbjct: 79 GRKAWKHLDFRNSATAELLKNPSL 102
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 609 GRWPWKSESAKECATTHLPKQPAL 680
GR WK + AT L K P+L
Sbjct: 79 GRKAWKHLDFRNSATAELLKNPSL 102
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 298 GSISLSPLY-PVPTIDCTSESLRSSIRVSPDFDLTRH 191
G+ S +Y P + L +RV P+FD H
Sbjct: 266 GAYSPKKVYAPEEVAEIVEYGLERGVRVIPEFDAPAH 302
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 476 RSDDGAKWANFVSRTGAVG 532
RS D A A+ +SR AVG
Sbjct: 88 RSGDEAALADMISRCNAVG 106
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 476 RSDDGAKWANFVSRTGAVG 532
RS D A A+ +SR AVG
Sbjct: 89 RSGDEAALADMISRCNAVG 107
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 650 NDSPAEATSPEMDGAE 697
NDSP S E+DG E
Sbjct: 418 NDSPESNRSNEIDGPE 433
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 660 LPKQPALKWMALKRFAYTLP 719
LP+ ++W+ L FAY +P
Sbjct: 113 LPEVERVQWIWLLIFAYLIP 132
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 660 LPKQPALKWMALKRFAYTLP 719
LP+ ++W+ L FAY +P
Sbjct: 113 LPEVERVQWIWLLIFAYLIP 132
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,012
Number of Sequences: 336
Number of extensions: 4127
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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