Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1004
(576 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 51 2e-05
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 51 2e-05
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 51 2e-05
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 48 1e-04
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 46 8e-04
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 44 0.003
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep... 42 0.008
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 41 0.024
UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole... 37 0.39
UniRef50_UPI0000D567BB Cluster: PREDICTED: similar to CG14995-PC... 33 4.8
UniRef50_UPI0000F2DA74 Cluster: PREDICTED: hypothetical protein;... 32 8.4
UniRef50_Q22ZC1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.4
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -1
Query: 210 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPSIGFHGTR 34
RLFTLETCCGYGY PAR L HP P + + + R + + + P L + F G
Sbjct: 25 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 82
Query: 33 TLRQKRKLFP 4
+KR+L P
Sbjct: 83 PFTKKRELSP 92
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -1
Query: 210 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSR-SEPYLPSIGFHGTR 34
RLFTLETCCGYGY PAR L HP P + + + R + + + P L + F G
Sbjct: 95 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 152
Query: 33 TLRQKRKLFP 4
+KR+L P
Sbjct: 153 PFTKKRELSP 162
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 247 CRLPLPTLFYRLEALHLGDLLRIWVRTG-ATSPRTSLT*IFKVRREYPDTAANAVLFAFR 71
CRLPL TLFY+LEA+HLGDLLR+ VR G T P + + PD A + +
Sbjct: 78 CRLPLSTLFYQLEAVHLGDLLRLSVRPGMKTIPSCGFS---RAVAGAPDPAQGLGSSSHK 134
Query: 70 TISPFYRIP 44
T SP IP
Sbjct: 135 TPSPDKPIP 143
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1
Query: 306 QTRHAPVLRANPYSEVTVQFADFP 235
Q H P+LRANPY EVT F P
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLP 81
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = -3
Query: 247 CRLPLPTLFYRLEALHLGDLLRIWVR 170
CRLPLPTLFY+ EA HLGDLLR+ VR
Sbjct: 78 CRLPLPTLFYQPEAAHLGDLLRLLVR 103
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 45.6 bits (103), Expect = 8e-04
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 GKSFLFCLSVRVPWNPIEGRYGSEREEHRICGGVRILSA-DLENSGEGCTWRCRAGSYPY 181
G+S LF + R PWN R G + + S L+ G GC + RAG YPY
Sbjct: 63 GESSLFFVKGRAPWNGFAPREGPVPWKASRFRRRPVSSRWPLKIRGRGC--KSRAGPYPY 120
Query: 182 PQQVSKVKSL 211
PQQVSKV SL
Sbjct: 121 PQQVSKVNSL 130
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -2
Query: 254 SNLPTSLTYIILSTRGSSPWRPAADMGTN 168
S LPTSL YI+ STRG SPWRP A +G N
Sbjct: 235 SILPTSLAYIVPSTRGCSPWRPDAFVGGN 263
>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
acetyl choline receptor - Acheta domesticus (House
cricket)
Length = 39
Score = 42.3 bits (95), Expect = 0.008
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3
Query: 253 PICRLPLPTLFYRLEALHLG 194
PICRLPLPT YRL+ALHLG
Sbjct: 20 PICRLPLPTFVYRLDALHLG 39
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 40.7 bits (91), Expect = 0.024
Identities = 30/108 (27%), Positives = 41/108 (37%)
Frame = -1
Query: 327 RPHPLPVQTRHAPVLRANPYSEVTVQFADFPYLHYSID*RLFTLETCCGYGYEPARHLHV 148
RP PL R L ++ ++ ADFPYLH S L P
Sbjct: 142 RPAPLRAPARPTQPLEPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTP 201
Query: 147 HPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFP 4
P P+F A + RTPP+ R R P G L ++++ P
Sbjct: 202 SP-PDFQGPARAHRTPPEPRRFPRHGPLSRGEPIPGRPALHKEKRTLP 248
Score = 36.3 bits (80), Expect = 0.52
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 211 EALHLGDLLRIWVRTGA 161
EA+HLGDLLRIWVR GA
Sbjct: 181 EAVHLGDLLRIWVRPGA 197
>UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7818,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 563
Score = 36.7 bits (81), Expect = 0.39
Identities = 30/87 (34%), Positives = 37/87 (42%)
Frame = -2
Query: 332 GTGRIRFPSKPDTPRSSEPILIPKLRSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 153
G G R P D S + +P L +LP RG + RP + R S
Sbjct: 222 GPGGTRRPRPADAAGGSGVLHVP-LPGHLPRP--------RGGAGPRPGGGLAAFSRSSS 272
Query: 152 TYIPHLNFQGPQRVSGHRRKCGALRVP 72
T H NF P SGH+ CGAL+VP
Sbjct: 273 TSSDHGNFAMP---SGHQATCGALKVP 296
>UniRef50_UPI0000D567BB Cluster: PREDICTED: similar to CG14995-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG14995-PC, isoform C - Tribolium castaneum
Length = 387
Score = 33.1 bits (72), Expect = 4.8
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 311 PSKPDTPRSSEPILIPKLRSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDISTYIPHLN 132
P +P PR +EP + P RS P TY+ R +S R + D+ST P N
Sbjct: 208 PRQPSPPRRAEPPVPPVRRSYSPEPPTYV--ERRRNSYERESPKQPPQYYDVST-TPPAN 264
Query: 131 FQGPQRVSGHRRKCGA 84
P + ++++C A
Sbjct: 265 HTAPFLTTPNQQRCPA 280
>UniRef50_UPI0000F2DA74 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 380
Score = 32.3 bits (70), Expect = 8.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 353 ARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRSNLP 243
AR PG P +P TPRS P+ P++R + P
Sbjct: 94 ARPEACPGPAACSRPERPPTPRSFHPLRSPRVRFSAP 130
>UniRef50_Q22ZC1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2305
Score = 32.3 bits (70), Expect = 8.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 314 FPSKPDTPRSSEPILIPKLRSNLPTSLTYIILSTRGSS 201
FP P T + S P L P ++++LPTS ST GSS
Sbjct: 1364 FPVGPATLQKSSPALSPAMQTSLPTSKVTKQYSTPGSS 1401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,578,688
Number of Sequences: 1657284
Number of extensions: 12799482
Number of successful extensions: 41355
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41336
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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