Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1004
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035906-1|AAH35906.1|  278|Homo sapiens Unknown (protein for IM...    32   1.7  
BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein LO...    31   3.8  
BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein LO...    31   3.8  
AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.              31   3.8  
AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.              31   3.8  

>BC035906-1|AAH35906.1|  278|Homo sapiens Unknown (protein for
           IMAGE:5247129) protein.
          Length = 278

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 563 PLNGGRTESCRSRTKRNRPTLRLGRSAEGRRTRVRIQ 453
           P  GG+ E+ R++ K   P L   RSA GR   VR Q
Sbjct: 220 PFRGGQAETLRAKLKTPGPLLLSPRSAPGRSQTVRTQ 256


>BC093754-1|AAH93754.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 29  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 160
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>BC093752-1|AAH93752.1|  587|Homo sapiens hypothetical protein
           LOC51057 protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 29  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 160
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AF131737-1|AAD20026.1|  587|Homo sapiens Unknown protein.
          Length = 587

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 29  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 160
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


>AC079353-1|AAY24034.1|  423|Homo sapiens unknown protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +2

Query: 29  SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 160
           SVR  W+P++ R+G+ ++ +++      +S D E   + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,589,847
Number of Sequences: 237096
Number of extensions: 1860571
Number of successful extensions: 5607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5606
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)