Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm1004
(576 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010311-1|AAQ23629.1| 511|Drosophila melanogaster AT31519p pro... 31 1.1
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 31 1.1
AE014134-2482|AAF53383.1| 511|Drosophila melanogaster CG15286-P... 31 1.1
X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein pr... 31 1.5
AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA... 31 1.5
AY102684-1|AAM27513.1| 872|Drosophila melanogaster LD24134p pro... 30 2.0
AE014297-1234|AAF54579.2| 872|Drosophila melanogaster CG6621-PA... 30 2.0
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein. 29 4.5
AY061190-1|AAL28738.1| 282|Drosophila melanogaster LD15224p pro... 29 6.0
AE013599-3423|AAF46870.1| 282|Drosophila melanogaster CG3732-PA... 29 6.0
BT003261-1|AAO25018.1| 569|Drosophila melanogaster LD23656p pro... 28 7.9
AE013599-1893|AAF58247.1| 569|Drosophila melanogaster CG10105-P... 28 7.9
>BT010311-1|AAQ23629.1| 511|Drosophila melanogaster AT31519p
protein.
Length = 511
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 224 ILSTRGSSPWRPAADMGTNRRDISTYIP 141
++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 567 LTVERRSYRIVPIAHETKPTDLTARKIRGRPENAGPDPVRNVRRFSR 427
LT + + +VP H PT R+ RG+ P P ++V R SR
Sbjct: 1989 LTGPQLNLGVVPTYHVHTPTPNAHRRARGQMATPAPPPTQSVLRLSR 2035
>AE014134-2482|AAF53383.1| 511|Drosophila melanogaster CG15286-PA
protein.
Length = 511
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 224 ILSTRGSSPWRPAADMGTNRRDISTYIP 141
++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343
>X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein
protein.
Length = 659
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Frame = -1
Query: 345 IDQTRHRPHPLPVQTRHAPVLRANPYSEVTVQFADFPYLHYSID*RLFTLETCCGYGYE- 169
++ RH P P+Q HA +L+ +P+ QF H + ++
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221
Query: 168 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 52
P H H HPS F A S PP S S P P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266
>AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA
protein.
Length = 659
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Frame = -1
Query: 345 IDQTRHRPHPLPVQTRHAPVLRANPYSEVTVQFADFPYLHYSID*RLFTLETCCGYGYE- 169
++ RH P P+Q HA +L+ +P+ QF H + ++
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221
Query: 168 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 52
P H H HPS F A S PP S S P P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266
>AY102684-1|AAM27513.1| 872|Drosophila melanogaster LD24134p
protein.
Length = 872
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 563 PLNGGRTESCRSRTK-RNRPTLRLGRSAEGRRTRVRIQS 450
PL GGR+ S RSR++ R+R R GR TR ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712
>AE014297-1234|AAF54579.2| 872|Drosophila melanogaster CG6621-PA
protein.
Length = 872
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 563 PLNGGRTESCRSRTK-RNRPTLRLGRSAEGRRTRVRIQS 450
PL GGR+ S RSR++ R+R R GR TR ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712
>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
Length = 1047
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = -2
Query: 359 HNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRSNLPTSLTYIILSTRGSS 201
+N + RP + + +K D R P+ IP L + PTSL+ I+S+RGSS
Sbjct: 412 NNNEANQRPISKQTETRTK-DGKRRITPMFIP-LHEDGPTSLSMNIVSSRGSS 462
>AY061190-1|AAL28738.1| 282|Drosophila melanogaster LD15224p
protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 541 NRADRARNETDRPYG*EDPRKAGERGSGSS 452
N+ DR R+ +D+P D + ERG+GSS
Sbjct: 43 NKCDRDRDGSDKPERDRDRDRERERGNGSS 72
>AE013599-3423|AAF46870.1| 282|Drosophila melanogaster CG3732-PA
protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 541 NRADRARNETDRPYG*EDPRKAGERGSGSS 452
N+ DR R+ +D+P D + ERG+GSS
Sbjct: 43 NKCDRDRDGSDKPERDRDRDRERERGNGSS 72
>BT003261-1|AAO25018.1| 569|Drosophila melanogaster LD23656p
protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 214 LEALHLGDLLRIWVRTGATSPRTS 143
LE HL LLRIW+++ ++SP S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFS 475
>AE013599-1893|AAF58247.1| 569|Drosophila melanogaster CG10105-PA
protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 214 LEALHLGDLLRIWVRTGATSPRTS 143
LE HL LLRIW+++ ++SP S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFS 475
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,283,630
Number of Sequences: 53049
Number of extensions: 596844
Number of successful extensions: 1954
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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