Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0999
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    26   0.12 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   3.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   6.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   6.1  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 317 HRPHPLPVQTRHAPVLRANPYPKLRIQFADFP 222
           H P P PV T H    R +PYP   +  A  P
Sbjct: 161 HYPPPPPVYTHH--YARYHPYPNFGVPPAGIP 190


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -3

Query: 51  SPFC-RIPWNSNAQA 10
           +P C +IPW+ NA+A
Sbjct: 325 NPICVQIPWDKNAEA 339


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -1

Query: 167 YGYEPARHLHVHPSPEFSRSAESIR 93
           + Y P  H   +P+P +   A+  R
Sbjct: 76  WNYSPDNHFEQYPNPTYYNLADPAR 100


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 121 NFQGPQRVSGHRRYC 77
           NF GP R++   R C
Sbjct: 601 NFHGPHRLAARSRRC 615


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 121 NFQGPQRVSGHRRYC 77
           NF GP R++   R C
Sbjct: 493 NFHGPHRLAARSRRC 507


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 317 HRPHPLPVQTRHAPVLRANP 258
           +R HPL + + H  +L  NP
Sbjct: 332 NRCHPLSLSSDHQAMLHHNP 351


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 109 DLENSGEGCTWRCRAGSYPYPQQVS 183
           D  N G+G + +C      YP  +S
Sbjct: 613 DSINEGDGVSVQCTVSKGDYPLNIS 637


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 283 TPRSSEPILIRSYGSNLPTSLPYIILSTRGSSP 185
           +P  + P L  S G   P S PY ++S   SSP
Sbjct: 109 SPSGNVPPLTPSPG---PPSHPYTVISNGYSSP 138


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 295 SKPDTPRSSEP 263
           SKP TP S EP
Sbjct: 227 SKPGTPPSGEP 237


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 163 GTNRRDISTYIPHLNFQGPQRVS 95
           G  R D  T+ PH     PQ+ S
Sbjct: 339 GIERADSVTWNPHKLLTAPQQCS 361


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
 Frame = -1

Query: 134 HPSPEFSRSAESIRTPPLLRCSSRSE-----PYLPSVGFH 30
           HP    S+ + +   PP L  + R E     P +P V F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,490
Number of Sequences: 336
Number of extensions: 1752
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)