Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0999
(341 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 27 0.083
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 2.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 2.4
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 5.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 5.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 7.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 7.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 9.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 20 9.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 20 9.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 9.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 9.5
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 26.6 bits (56), Expect = 0.083
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 331 SSRPGTGRIRFPSK-PDTPRSSEPILIRSYGSN 236
SS PGTGR P+K P + R S +YG N
Sbjct: 393 SSTPGTGREHDPAKFPPSFRISRVAAYNTYGRN 425
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 2.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 267 SEDRGVSGLDGKRMRPVPGLDDVR 338
S R G R RP+P DD+R
Sbjct: 915 SPGRAWPGDSDIRQRPIPRSDDIR 938
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 2.4
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Frame = -2
Query: 340 ARTSSRPGTGRIRFPSKPDTPRSSEPILIRSYGSNLPT------SLPYIILSTRGSSPWR 179
A T+ RPGT + KP P +S + G +P+ LP+ + P+
Sbjct: 1111 AATNIRPGTADNKPQLKPQKPFTSPGGIPGPNGIKMPSFMEGMPHLPFTPFNFWNPPPFM 1170
Query: 178 PAADMGTNRRDISTYIPHLNFQGPQRVSG 92
P+ M ++ T +P F R+ G
Sbjct: 1171 PSPFM-AGAPNVPTILPEQYF-ATSRIRG 1197
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 89 VSGYSLRTLKIQVRDVR 139
V+ ++ LKIQ+RDV+
Sbjct: 14 VNAMTIEELKIQLRDVQ 30
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 5.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 201 VDRIM*GREVGKLDP*LRIRIGSEDRGVSGLD 296
VD+++ E GKL P ++RI +E V +D
Sbjct: 250 VDQVL---EDGKLKPNKKVRISNEMSKVKVID 278
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 60 RTLSPFCRIPWNS 22
RT+ P+ + WNS
Sbjct: 463 RTMHPYDHLVWNS 475
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.6 bits (41), Expect = 5.4
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+PV + P P+ ++ Q F
Sbjct: 339 NIINIEQIPVPVPVYCGNFPPRPMGPWISIQEQIPRF 375
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 7.2
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 337 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQIPRF 373
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 311 PHPLPVQTRHAPVLRANPYPKL 246
P PLP A + + +PY L
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 130 GCTWRCRAGSYPYPQQVSK 186
GCT R P+P +V+K
Sbjct: 442 GCTAELRKKEPPHPIRVAK 460
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 130 GCTWRCRAGSYPYPQQVSK 186
GCT R P+P +V+K
Sbjct: 428 GCTAELRKKEPPHPIRVAK 446
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 130 GCTWRCRAGSYPYPQQVSK 186
GCT R P+P +V+K
Sbjct: 462 GCTAELRKKEPPHPIRVAK 480
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 130 GCTWRCRAGSYPYPQQVSK 186
GCT R P+P +V+K
Sbjct: 411 GCTAELRKKEPPHPIRVAK 429
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 116 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 152
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 9.5
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 335 NIVQTRHRPHPLPVQTRHAPVLRANPYPKLRIQFADF 225
NI+ P P+P+ + P P+ ++ Q F
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVPRF 148
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 62 SEPYLPSVGFHGTRTLRQK 6
SE P+ HG R RQ+
Sbjct: 472 SENNYPTTSIHGDRLQRQR 490
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 86 PLLRCSSRSEPYLPSVGFH 30
P C + YLPS G H
Sbjct: 230 PTFLCKGDGKWYLPSGGCH 248
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.8 bits (39), Expect = 9.5
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = -3
Query: 240 PICRLPFPTLFYRL 199
P C P+P +F+ +
Sbjct: 216 PCCDEPYPDIFFNI 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,085
Number of Sequences: 438
Number of extensions: 2198
Number of successful extensions: 23
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -