Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0998
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.4  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    23   9.5  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = -1

Query: 462 DQRMLIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYV 283
           +QR+  +R+N++     + H  I     V + + FR+ +    LQ++          + V
Sbjct: 471 EQRLEADRYNFVTECFFMTHKAIDLGYRVCIEKFFRMNRELHRLQTMYYEMMSQNGAD-V 529

Query: 282 P--IKALVEKSV*XFVIILQNVIL 217
           P  +  +V   +  F + LQNV+L
Sbjct: 530 PSDLMQMVSSQMQQF-LCLQNVLL 552


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 613 KFYENRLNRV*DSDYI 566
           +F+E RL +V D DYI
Sbjct: 143 EFFETRLAKVEDDDYI 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,375
Number of Sequences: 2352
Number of extensions: 14256
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)