Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0998
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p pro...    74   2e-13
AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA...    74   2e-13
DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.    69   5e-12
AY060788-1|AAL28336.1|  373|Drosophila melanogaster GH25868p pro...    39   0.006
AE014296-2491|AAF49653.1|  373|Drosophila melanogaster CG7011-PA...    39   0.006
BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p pro...    29   6.2  
AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA...    29   6.2  

>AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p
           protein.
          Length = 354

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = -1

Query: 450 LIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKA 271
           L+ERF+YIH  M +PH  I++   +L SR FR+++RH FL+ LGRAQYDP+K  Y+  K 
Sbjct: 267 LVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYDPQKDLYISPKT 326

Query: 270 LVEKSV*XFV 241
           +VE +   FV
Sbjct: 327 IVEGNNFYFV 336


>AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA
           protein.
          Length = 354

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = -1

Query: 450 LIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKA 271
           L+ERF+YIH  M +PH  I++   +L SR FR+++RH FL+ LGRAQYDP+K  Y+  K 
Sbjct: 267 LVERFSYIHQDMGLPHAQIVQCPELLASREFRLRERHEFLKLLGRAQYDPQKDLYISPKT 326

Query: 270 LVEKSV*XFV 241
           +VE +   FV
Sbjct: 327 IVEGNNFYFV 336


>DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.
          Length = 354

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = -1

Query: 450 LIERFNYIHNIMKIPHTTILENAGVLLSRVFRIKQRHLFLQSLGRAQYDPKKVNYVPIKA 271
           L+ERF+YIH  M +PH  I++   +L SR FR++ RH FL+ LGRAQYD +K  Y+  K 
Sbjct: 267 LVERFSYIHQDMGLPHAQIVQCPELLASREFRLRGRHEFLKLLGRAQYDSQKDLYISPKT 326

Query: 270 LVEKSV*XFV 241
           +VE +   FV
Sbjct: 327 IVEGNNFYFV 336


>AY060788-1|AAL28336.1|  373|Drosophila melanogaster GH25868p
           protein.
          Length = 373

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +1

Query: 49  FATNICAIIGGVFTVAGIL 105
           FATN C+IIGGVFTVAGIL
Sbjct: 334 FATNCCSIIGGVFTVAGIL 352


>AE014296-2491|AAF49653.1|  373|Drosophila melanogaster CG7011-PA
           protein.
          Length = 373

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +1

Query: 49  FATNICAIIGGVFTVAGIL 105
           FATN C+IIGGVFTVAGIL
Sbjct: 334 FATNCCSIIGGVFTVAGIL 352


>BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p
           protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 49  FATNICAIIGGVFTVAGILMLYCITQLMHL 138
           F+      +GG+F   G+++ Y  T L+HL
Sbjct: 296 FSCRTVVFVGGIFCAMGMILSYFATSLLHL 325


>AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA
           protein.
          Length = 855

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 49  FATNICAIIGGVFTVAGILMLYCITQLMHL 138
           F+      +GG+F   G+++ Y  T L+HL
Sbjct: 296 FSCRTVVFVGGIFCAMGMILSYFATSLLHL 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,870,737
Number of Sequences: 53049
Number of extensions: 537308
Number of successful extensions: 1558
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1558
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)