Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0997
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003187-1|AAO24942.1|  629|Drosophila melanogaster RE63465p pro...    29   5.4  
AY058246-1|AAL13475.1|  797|Drosophila melanogaster GH01206p pro...    29   5.4  
AE014134-573|AAF51132.3|  797|Drosophila melanogaster CG3332-PA,...    29   5.4  
AE014134-572|AAN10385.1|  629|Drosophila melanogaster CG3332-PB,...    29   5.4  

>BT003187-1|AAO24942.1|  629|Drosophila melanogaster RE63465p
           protein.
          Length = 629

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 460 IYIYYNSFIFMFFFVLIAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFL 615
           +Y+Y  S +F+ F  + A  NR+ F+  +   E  S  +++++   F   +L
Sbjct: 112 VYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYL 163


>AY058246-1|AAL13475.1|  797|Drosophila melanogaster GH01206p
           protein.
          Length = 797

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 460 IYIYYNSFIFMFFFVLIAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFL 615
           +Y+Y  S +F+ F  + A  NR+ F+  +   E  S  +++++   F   +L
Sbjct: 280 VYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYL 331


>AE014134-573|AAF51132.3|  797|Drosophila melanogaster CG3332-PA,
           isoform A protein.
          Length = 797

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 460 IYIYYNSFIFMFFFVLIAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFL 615
           +Y+Y  S +F+ F  + A  NR+ F+  +   E  S  +++++   F   +L
Sbjct: 280 VYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYL 331


>AE014134-572|AAN10385.1|  629|Drosophila melanogaster CG3332-PB,
           isoform B protein.
          Length = 629

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +1

Query: 460 IYIYYNSFIFMFFFVLIAETNRTPFDFAEGERELVSGFNIEYRRGGFALIFL 615
           +Y+Y  S +F+ F  + A  NR+ F+  +   E  S  +++++   F   +L
Sbjct: 112 VYLYVGSILFVIFLYISAFRNRSLFNALKDYHEKNSNVHLKHKVTHFGSFYL 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,138,831
Number of Sequences: 53049
Number of extensions: 190038
Number of successful extensions: 516
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)