Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0993
         (594 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    52   1e-05
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    47   3e-04
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    38   0.13 
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|...    36   0.54 
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    36   0.54 
UniRef50_Q0QMQ1 Cluster: Polyketide synthase type I; n=1; Strept...    33   3.8  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 28/40 (70%), Positives = 30/40 (75%)
 Frame = -3

Query: 466 RLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPVPGVG 347
           RLALQ  LVK FKV SF+L+GL RV Y YFSSLPP  G G
Sbjct: 64  RLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = -2

Query: 335 LLPSLDVVAVSQAPSPESNPDSP 267
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = -2

Query: 494 SWNYRGCWHQTCPPIVPR*NI*SVLIPITRPRKSPVSLFFVTTSRAGSG*FARLLPSLDV 315
           SWNYR CWHQT  P++    +     PI   ++   + + +   +  SG  +RLL  +D+
Sbjct: 7   SWNYRSCWHQT-GPLLGFGTV-ENRTPIHSTKRHQWN-WSLPPPKVSSGKVSRLLLPVDI 63

Query: 314 VAVSQAPSP 288
           VA+SQAPSP
Sbjct: 64  VAISQAPSP 72


>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 38.3 bits (85), Expect = 0.13
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 24  VDNCGNSRANTCNQNSDQ*WDECLY*IKTN 113
           +DNCGNSRANTC +      D C+Y  KTN
Sbjct: 469 LDNCGNSRANTCRRAPTS-GDACIYQTKTN 497


>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
           tropicalis|Rep: Novel protein - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 118

 Score = 36.3 bits (80), Expect = 0.54
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 208 MSALSTFDGSFCDYHGV 258
           MSALSTFDG+FC YHG+
Sbjct: 1   MSALSTFDGTFCAYHGL 17


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 36.3 bits (80), Expect = 0.54
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -2

Query: 314 VAVSQAPSPESNPDSPLPV 258
           +A+SQAPSPESN +SPLPV
Sbjct: 372 LAISQAPSPESNSNSPLPV 390


>UniRef50_Q0QMQ1 Cluster: Polyketide synthase type I; n=1;
            Streptomyces aculeolatus|Rep: Polyketide synthase type I
            - Streptomyces aculeolatus
          Length = 4308

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -2

Query: 494  SWNYRGCWHQTCPPIVPR*NI*SVLIPITRPRKSPVSLFFVTTSRAGS 351
            SW Y   WH   PP  PR  +    + +T P  SP +        AG+
Sbjct: 3664 SWRYTVTWHPHTPPAAPRAVLTGTWLLLTPPEASPPAALVAALEAAGA 3711


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,312,646
Number of Sequences: 1657284
Number of extensions: 12180442
Number of successful extensions: 34209
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34180
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)