Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0993
         (594 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF216664-2|AAF23814.1|  736|Drosophila melanogaster xmas-1 protein.    29   6.3  
AE014298-2528|AAF48702.2|  736|Drosophila melanogaster CG32561-P...    29   6.3  
AY061180-1|AAL28728.1|  373|Drosophila melanogaster LD14717p pro...    28   8.3  
AE014297-3986|AAF56616.1|  373|Drosophila melanogaster CG6425-PA...    28   8.3  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   8.3  

>AF216664-2|AAF23814.1|  736|Drosophila melanogaster xmas-1 protein.
          Length = 736

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -2

Query: 326 SLDVVAVSQAPSPESNPDSPLPVTPW*---SQKLPSKVDKADI*K 201
           +L+ +  +QA  P S P SP   T +    SQKLP    KADI K
Sbjct: 581 TLEAIVKAQA-KPRSEPKSPSSATDYHRVASQKLPHVTSKADISK 624


>AE014298-2528|AAF48702.2|  736|Drosophila melanogaster CG32561-PA
           protein.
          Length = 736

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -2

Query: 326 SLDVVAVSQAPSPESNPDSPLPVTPW*---SQKLPSKVDKADI*K 201
           +L+ +  +QA  P S P SP   T +    SQKLP    KADI K
Sbjct: 581 TLEAIVKAQA-KPRSEPKSPSSATDYHRVASQKLPHVTSKADISK 624


>AY061180-1|AAL28728.1|  373|Drosophila melanogaster LD14717p
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 341 ARLLPSLDVVAVSQAPSPESNPDSPLPVTP 252
           ARL   L+ +AVS+   P   P +P PV P
Sbjct: 165 ARLNSQLEQIAVSEPVMPLKTPKAPSPVAP 194


>AE014297-3986|AAF56616.1|  373|Drosophila melanogaster CG6425-PA
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 341 ARLLPSLDVVAVSQAPSPESNPDSPLPVTP 252
           ARL   L+ +AVS+   P   P +P PV P
Sbjct: 165 ARLNSQLEQIAVSEPVMPLKTPKAPSPVAP 194


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 164 VIQIHQN*RLRTRGPPSIGFDL 99
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,285,213
Number of Sequences: 53049
Number of extensions: 578580
Number of successful extensions: 1931
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)