Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0990
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 4.3
AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical ... 28 5.7
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 7.5
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 7.5
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 27 7.5
U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome reg... 27 7.5
U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome reg... 27 7.5
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 27 7.5
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 9.9
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 27 9.9
AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical... 27 9.9
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 27 9.9
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 27 9.9
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 27 9.9
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/96 (20%), Positives = 40/96 (41%)
Frame = +3
Query: 30 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 209
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 210 LPDSARLASALEAFRIIPRMVASHHRPLGRVHEPNV 317
D LA+ E ++ + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/96 (20%), Positives = 40/96 (41%)
Frame = +3
Query: 30 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 209
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 210 LPDSARLASALEAFRIIPRMVASHHRPLGRVHEPNV 317
D LA+ E ++ + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>AL132847-1|CAB63371.1| 375|Caenorhabditis elegans Hypothetical
protein Y48G10A.2 protein.
Length = 375
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = -3
Query: 271 TIRGIILNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETR 119
+++G I + + ++ K ++ EP+E+ + D+ + ++HSK E +
Sbjct: 306 SLKGQIKSENYTSIAVTRLYKMLIRTEPKETALRRAADYLNELTHSKTEKK 356
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 557 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 447
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 298 RPSGRWCEATIRGIILNASKAEAS 227
RPSG WC G+ L ++ EAS
Sbjct: 35 RPSGPWCVKLFVGLYLQGNRNEAS 58
>U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform b
protein.
Length = 420
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 3 DYSVARHRTELYPDLRSRDARVKKKTDSI 89
D +V RH T L S D +KKK DSI
Sbjct: 18 DQNVIRHLTNLVKSPASGDDDIKKKEDSI 46
>U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform a
protein.
Length = 438
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 3 DYSVARHRTELYPDLRSRDARVKKKTDSI 89
D +V RH T L S D +KKK DSI
Sbjct: 36 DQNVIRHLTNLVKSPASGDDDIKKKEDSI 64
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 337 REEPQFRTFGSCTRPSGRWCEATIRGIILNASKAEASLA 221
R EP +R F RPSG WC G +A+KA+A A
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTG--FHAAKADAEAA 288
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 34 YIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNA 141
YIRT +VLRKKP S+ D +++NA
Sbjct: 264 YIRTVRGSQYVLRKKPSGSLLPKAHQVDREFKIMNA 299
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 14 SPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
S N VI+GPSE CTC + + S +SK + + A+
Sbjct: 180 SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical
protein W10G11.15 protein.
Length = 211
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -3
Query: 298 RPSGRWCEATIRGIILNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 134
RPSG WC G + AE S G + ++ R Q ++++ S
Sbjct: 49 RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 14 SPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
S N VI+GPSE CTC + + S +SK + + A+
Sbjct: 180 SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 14 SPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
S N VI+GPSE CTC + + S +SK + + A+
Sbjct: 180 SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 14 SPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 133
S N VI+GPSE CTC + + S +SK + + A+
Sbjct: 180 SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,285,512
Number of Sequences: 27780
Number of extensions: 264870
Number of successful extensions: 825
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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