Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0986
(624 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.6
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.1
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 4.8
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 22 4.8
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 6.3
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 8.4
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 8.4
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 8.4
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 8.4
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 8.4
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 8.4
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 8.4
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 8.4
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.4
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 161 WARMVQPYYRMLTFLMKCHPLTGSVFQNEWYS*RSWS-FW 277
W R Q YY + F+ +C G+ F+ +W + + + FW
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQWIAGNAGTHFW 243
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 161 WARMVQPYYRMLTFLMKCHPLTGSVFQNEWYS*RSWS-FW 277
W R Q YY + F+ +C G+ F+ +W + + + FW
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQWIAGNAGTHFW 243
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 379 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 278
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 379 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 278
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 379 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 278
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 379 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 278
P + + G MDSN + A+Y+++ + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 210 NVIL*QGAYSRTSGTAKGAGAFGYFEVTHDITKYSAAK 323
N+ L + ++ G G F V+H T YSA +
Sbjct: 199 NIDLYEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQ 236
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.8 bits (44), Expect = 4.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 210 NVIL*QGAYSRTSGTAKGAGAFGYFEVTHDITKYSAAK 323
N+ L + ++ G G F V+H T YSA +
Sbjct: 206 NIDLYEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQ 243
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.4 bits (43), Expect = 6.3
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 46 RDPATDQLINYKKTLKDSPGFIT-TKSGAPVGI 141
+ P++ ++ + T SPGF+T TK+ V +
Sbjct: 65 KSPSSPRISSPSSTKSGSPGFLTYTKADRDVDL 97
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 523 PYSEENPATHLKDPD 567
P S NPA +DPD
Sbjct: 4 PSSASNPAVSERDPD 18
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 564 WIFQMCCRVLF*VWI 520
W F C V+ VWI
Sbjct: 330 WAFSNACEVMAIVWI 344
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 564 WIFQMCCRVLF*VWI 520
W F C V+ VWI
Sbjct: 330 WAFSNACEVMAIVWI 344
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 246 SFWNTLPVK 220
SFW++LP+K
Sbjct: 525 SFWDSLPIK 533
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 246 SFWNTLPVK 220
SFW++LP+K
Sbjct: 525 SFWDSLPIK 533
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 246 SFWNTLPVK 220
SFW++LP+K
Sbjct: 525 SFWDSLPIK 533
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 246 SFWNTLPVK 220
SFW++LP+K
Sbjct: 525 SFWDSLPIK 533
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 8.4
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -1
Query: 246 SFWNTLPVK 220
SFW++LP+K
Sbjct: 525 SFWDSLPIK 533
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 21.0 bits (42), Expect = 8.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 437 ELYSKTSRVTNSISRSTLSTNC*ESNSNRCP 345
+L KT TN+ + S S + +N+N P
Sbjct: 996 KLCDKTETHTNNRTHSATSNSSVNANTNNIP 1026
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,445
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -