Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0986
(624 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 111 3e-25
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 110 8e-25
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 103 7e-23
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 103 7e-23
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 1.4
At3g59230.1 68416.m06603 F-box family protein contains F-box dom... 29 3.3
At1g18810.1 68414.m02344 phytochrome kinase substrate-related co... 29 3.3
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 3.3
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 3.3
At1g17030.1 68414.m02069 expressed protein 28 5.8
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 27 7.7
At5g07970.1 68418.m00926 dentin sialophosphoprotein-related cont... 27 7.7
At4g35510.1 68417.m05048 expressed protein 27 7.7
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 27 7.7
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 27 7.7
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 111 bits (268), Expect = 3e-25
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRSFAVK 434
A+GA A G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+RDPR FAVK
Sbjct: 66 ARGASAKGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRD-PTFSRVLSILRREPCNTSERSRHVLGLF 584
FYT +G +DLVGNN P+FF+RD F ++ L+ P + + + +L F
Sbjct: 126 FYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFF 176
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/53 (58%), Positives = 39/53 (73%)
Frame = +1
Query: 94 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVV
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVV 64
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 508 FPEFYPYSEENPATHLKDPDMFWDFLDLRPETIHQLLYL 624
FP+ + NP +H+++ DF PE++H +L
Sbjct: 151 FPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFL 189
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 110 bits (264), Expect = 8e-25
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRSFAVK 434
A+GA A G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+RDPR FAVK
Sbjct: 66 ARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRD-PTFSRVLSILRREPCNTSERSRHVLGLF 584
FYT +G +DLVGNN P+FFIRD F ++ L+ P + + + +L F
Sbjct: 126 FYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFF 176
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +1
Query: 94 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVV
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVV 64
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 103 bits (248), Expect = 7e-23
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRSFAVK 434
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD R FAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRDP-TFSRVLSILRREP 542
FYT +G +DLVGNNTP+FFIRD F V+ L+ P
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNP 162
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 76 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVV
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVV 64
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 103 bits (248), Expect = 7e-23
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRSFAVK 434
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD R FAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 435 FYTDDGVWDLVGNNTPIFFIRDP-TFSRVLSILRREP 542
FYT +G +DLVGNNTP+FFIRD F V+ L+ P
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNP 162
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 76 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVV 252
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVV
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVV 64
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 85 TLKDSPGFITTKSGAPVGIKTAIQTVG 165
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At3g59230.1 68416.m06603 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 519 KLGKMLDLL*RKWEYYFQLNPTLHHQYRTLQQNFEGHEQYQQIHS 385
K + LL RKW Y+F P L Q G+++ +IH+
Sbjct: 32 KEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETEIHT 76
>At1g18810.1 68414.m02344 phytochrome kinase substrate-related
contains weak similarity to Swiss-Prot:Q9SWI1
phytochrome kinase substrate 1 [Arabidopsis thaliana]
Length = 387
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -3
Query: 607 GWSLV*GLKSPKTCLDLSDVLQGSLLS--MDKTRENVGSLIKKMGVLFPTKSHTPSSV*N 434
GWS+V G + ++ + D+++ + + KT+ +G ++ G L KSH SV +
Sbjct: 294 GWSVVTGSMADQSVISDFDMMKRVTRNGPVVKTKPVIGEKVRSAGFLSGCKSHKAVSVVD 353
Query: 433 FTAKLRGSRTVSADPLS 383
+ K++ + V +S
Sbjct: 354 SSRKVKETAKVDHHEMS 370
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 85 TLKDSPGFITTKSGAPVGIKTAIQTVG 165
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 123 WSSCWNQNGDTNGGQEWS 176
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 459 PTLHHQYRTLQQNFEGH 409
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 402 TVRDPRSFAVKFYTDDGVWDLVGNNT 479
T DP + F +DD +W+ GN+T
Sbjct: 425 TALDPTEEKILFGSDDNLWEAFGNST 450
>At5g07970.1 68418.m00926 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1097
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 402 TVRDPRSFAVKFYTDDGVWDLVGNNT 479
T DP + F +DD +W+ GN+T
Sbjct: 422 TTLDPTEEKILFGSDDNLWEAFGNST 447
>At4g35510.1 68417.m05048 expressed protein
Length = 333
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = -3
Query: 613 VDGWSLV*GLKSPKTCLDLSDVLQGSLLSMDKTRENVGSLIKKMGVLFPTKSHTPSSV*N 434
VD S GL+ ++ D +D S+L M+K+ E SL+K+ G + K P S+ N
Sbjct: 226 VDSDSSYEGLEIARSNRDEAD----SMLMMEKSGEESNSLVKRRGRVKLKK--LPLSICN 279
Query: 433 FTAKLRGSRTVSADPLSPP 377
+ G+ + S P++ P
Sbjct: 280 SRNQENGTSSASPLPVAQP 298
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 236 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 126
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 119 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 236 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 126
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 201 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,336,681
Number of Sequences: 28952
Number of extensions: 298290
Number of successful extensions: 828
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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